Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3236 ATGGACGAAATTCTCAAGAACATTTTCCCTGCTGCAATTGAAGCTGCAAAACAACAACATCAAGAACATCAACAGGAAGAACAACAATCCAACAACAACAACAACATTGACGATGTTTGGACGGACATCGTCGCTGATGGTGGTGCAAACCATCTTCATCATCAACAACATTATCATCATCCTTCTTCTGATGAAGGTTTTTCTGCTTGCGGTGCCGGTGGTGGTGATGAAGTTACTCTTGAAGATTTCTTGGTGAAAGCTGGTGCTGTTCCTTACCCTCATCATCAATATCCTTCTTCTTCTTCTGCCGTTGATGACGGTTCGCATTCTCTACAAGTTGCTTTGGGAAAACGAAAGACTGTTGATGAAACGCTTGATAAAGCTGCTCTTCAGAAACAGAAAAGAATGATCAAGAATCGTGAGTCTGCTGCTAGGTCAAGAGAACGCAAACAGGCTTATACTACTGAGCTTGAGAGCCTGGTTAAGCATTTGGAGATAGAGAATAAGCAGTTAGAAGAAGAACAGGCTGAGAGGAAAAAGCTGAGGTTCAAACAACTCCAAGAGTTCCTCATTCCAATTACGGAGCAGCCAAGACCAAAACGGAAACTGCGGAGATCAAATTCATCTTAA 630 0.4238 MDEILKNIFPAAIEAAKQQHQEHQQEEQQSNNNNNIDDVWTDIVADGGANHLHHQQHYHHPSSDEGFSACGAGGGDEVTLEDFLVKAGAVPYPHHQYPSSSSAVDDGSHSLQVALGKRKTVDETLDKAALQKQKRMIKNRESAARSRERKQAYTTELESLVKHLEIENKQLEEEQAERKKLRFKQLQEFLIPITEQPRPKRKLRRSNSS* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3236 209 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 208 IPR043452 GO:0003700|GO:0045893
Mtr4g3236 209 Coils Coil 13 33 - -
Mtr4g3236 209 Pfam bZIP transcription factor 128 183 IPR004827 GO:0003700|GO:0006355
Mtr4g3236 209 Gene3D - 130 185 - -
Mtr4g3236 209 SMART brlzneu 127 191 IPR004827 GO:0003700|GO:0006355
Mtr4g3236 209 SUPERFAMILY Leucine zipper domain 131 181 IPR046347 GO:0003700|GO:0006355
Mtr4g3236 209 CDD bZIP_plant_BZIP46 131 177 - -
Mtr4g3236 209 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 134 149 IPR004827 GO:0003700|GO:0006355
Mtr4g3236 209 Coils Coil 154 186 - -
Mtr4g3236 209 PANTHER OS05G0437700 PROTEIN 18 208 - -
Mtr4g3236 209 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 129 180 IPR004827 GO:0003700|GO:0006355
Mtr4g3236 209 PRINTS cAMP response element binding (CREB) protein signature 126 142 - -
Mtr4g3236 209 PRINTS cAMP response element binding (CREB) protein signature 144 164 - -
Mtr4g3236 209 PRINTS cAMP response element binding (CREB) protein signature 164 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3236 Mtr-Chr4 45779185 45782140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3236 31 208 bZIP Transcription Factor Family AT1G03970 43.011 6.75e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr4g3236 bZIP_1 3e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3236 K14432 - cam:101514708 155.606