Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3230 ATGGTCAATTTATTCAATGTTGAAGCCATAGAGAGCGCAAAGCCTGTTCTGCTAATGATAGTGGTCCAATCTATATATGCATTGGTGAATATTATGTTCAAGATAGTAATAAATGATGGAACAAGCTTAAGTATTCTTATTGCATACCGATTCATCTTTTCTACTGCCTTCATTGTTCCCTTTGCTATCCTCTTTGAAAGGAAAAGTGTGCACAGCCTTACTGGCAGGGTTATATTCCAAGCTTTTCTTTGTGGGTTATTTGGGGGATCCTTGCAACAAAACCTATATGTTAAATCTTTGGCCTTGGTATCTACCACATATACTGTAGCCATGTTAAATCTCATCCCTGCCATTACCTACATCATGGTTGTTTCTCTTAGGATGGAGAAGCCAAATCTTGGAACTTCAGCTGGGAATGCCAAGTTACTAGGAACTTTAGTTGGAATTGGTGGTGCCATGATCCTCACATTATACAAAGGCAGGAGGTTATTCAACTGGTCAATGCACAGTGATTTATTGCAACATGCATCATCACCACCACAGGGTGCTCCTGCTAAATCTCACATGTGGGGCATCATGCTAGCTCTGGCCACTTCTTTCAATTTCTCATTGTGGTTTATAATCCAGTCAAAGATGACTCAGAATTTCCCGTGGCACTATTCAATTGCGGCTTTAACTTCTATAATGAGCGCAATCCAATCGATTGTATACGCTCTTTGTACAGAGAGATATCGGAGCCAGTGGAAACTTGACTGGAACTTGAGGCTTTTAACAGTCGCTTCAGCGGGTATATTGGCCTCTGGTACATGCTTTGTCCTGTTAGCATGGTGTGTGCGCTTGAAGGGACCTCTATTTGTGTCGGCTTTCAATCCTCTAACGCTTTTGATGGTGGCCTTAGCCGGATCAGTCTTACTAAATGAATACATCACCATAGGAAGTCTAATAGGAGCTGTGCTGATTGTGTGCGGATTGTACATGTTATTATGGGGGAAAAGCAAAGAAACAAGGAAAGTGGAGAGTGAGATTATGTCTGCAAAAGGCCCTATCAAATGTGATTCAATACATATTTCGAATGAGAAGAAGGCGGCAAGTGTTGGTCCTGTTAAATCATCAACTCTCAACAATACTTCCGGCAAAGTATAA 1143 0.4129 MVNLFNVEAIESAKPVLLMIVVQSIYALVNIMFKIVINDGTSLSILIAYRFIFSTAFIVPFAILFERKSVHSLTGRVIFQAFLCGLFGGSLQQNLYVKSLALVSTTYTVAMLNLIPAITYIMVVSLRMEKPNLGTSAGNAKLLGTLVGIGGAMILTLYKGRRLFNWSMHSDLLQHASSPPQGAPAKSHMWGIMLALATSFNFSLWFIIQSKMTQNFPWHYSIAALTSIMSAIQSIVYALCTERYRSQWKLDWNLRLLTVASAGILASGTCFVLLAWCVRLKGPLFVSAFNPLTLLMVALAGSVLLNEYITIGSLIGAVLIVCGLYMLLWGKSKETRKVESEIMSAKGPIKCDSIHISNEKKAASVGPVKSSTLNNTSGKV* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3230 380 PANTHER WAT1-RELATED PROTEIN 13 366 - -
Mtr4g3230 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 160 - -
Mtr4g3230 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 333 - -
Mtr4g3230 380 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020|GO:0016021
Mtr4g3230 380 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020|GO:0016021
Mtr4g3230 380 PANTHER WAT1-RELATED PROTEIN 13 366 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3230 Mtr-Chr4 45725428 45727721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3230 8 336 Nodulin-like Gene Family AT1G68170 40.303 2.59e-77 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3230 - - mtr:MTR_4g094360 542.347