LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr4g3230	ATGGTCAATTTATTCAATGTTGAAGCCATAGAGAGCGCAAAGCCTGTTCTGCTAATGATAGTGGTCCAATCTATATATGCATTGGTGAATATTATGTTCAAGATAGTAATAAATGATGGAACAAGCTTAAGTATTCTTATTGCATACCGATTCATCTTTTCTACTGCCTTCATTGTTCCCTTTGCTATCCTCTTTGAAAGGAAAAGTGTGCACAGCCTTACTGGCAGGGTTATATTCCAAGCTTTTCTTTGTGGGTTATTTGGGGGATCCTTGCAACAAAACCTATATGTTAAATCTTTGGCCTTGGTATCTACCACATATACTGTAGCCATGTTAAATCTCATCCCTGCCATTACCTACATCATGGTTGTTTCTCTTAGGATGGAGAAGCCAAATCTTGGAACTTCAGCTGGGAATGCCAAGTTACTAGGAACTTTAGTTGGAATTGGTGGTGCCATGATCCTCACATTATACAAAGGCAGGAGGTTATTCAACTGGTCAATGCACAGTGATTTATTGCAACATGCATCATCACCACCACAGGGTGCTCCTGCTAAATCTCACATGTGGGGCATCATGCTAGCTCTGGCCACTTCTTTCAATTTCTCATTGTGGTTTATAATCCAGTCAAAGATGACTCAGAATTTCCCGTGGCACTATTCAATTGCGGCTTTAACTTCTATAATGAGCGCAATCCAATCGATTGTATACGCTCTTTGTACAGAGAGATATCGGAGCCAGTGGAAACTTGACTGGAACTTGAGGCTTTTAACAGTCGCTTCAGCGGGTATATTGGCCTCTGGTACATGCTTTGTCCTGTTAGCATGGTGTGTGCGCTTGAAGGGACCTCTATTTGTGTCGGCTTTCAATCCTCTAACGCTTTTGATGGTGGCCTTAGCCGGATCAGTCTTACTAAATGAATACATCACCATAGGAAGTCTAATAGGAGCTGTGCTGATTGTGTGCGGATTGTACATGTTATTATGGGGGAAAAGCAAAGAAACAAGGAAAGTGGAGAGTGAGATTATGTCTGCAAAAGGCCCTATCAAATGTGATTCAATACATATTTCGAATGAGAAGAAGGCGGCAAGTGTTGGTCCTGTTAAATCATCAACTCTCAACAATACTTCCGGCAAAGTATAA	1143	0.4129	MVNLFNVEAIESAKPVLLMIVVQSIYALVNIMFKIVINDGTSLSILIAYRFIFSTAFIVPFAILFERKSVHSLTGRVIFQAFLCGLFGGSLQQNLYVKSLALVSTTYTVAMLNLIPAITYIMVVSLRMEKPNLGTSAGNAKLLGTLVGIGGAMILTLYKGRRLFNWSMHSDLLQHASSPPQGAPAKSHMWGIMLALATSFNFSLWFIIQSKMTQNFPWHYSIAALTSIMSAIQSIVYALCTERYRSQWKLDWNLRLLTVASAGILASGTCFVLLAWCVRLKGPLFVSAFNPLTLLMVALAGSVLLNEYITIGSLIGAVLIVCGLYMLLWGKSKETRKVESEIMSAKGPIKCDSIHISNEKKAASVGPVKSSTLNNTSGKV*	381

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr4g3230	380	PANTHER	WAT1-RELATED PROTEIN	13	366	-	-
	Mtr4g3230	380	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	49	160	-	-
	Mtr4g3230	380	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	248	333	-	-
	Mtr4g3230	380	Pfam	EamA-like transporter family	189	328	IPR000620	GO:0016020\|GO:0016021
	Mtr4g3230	380	Pfam	EamA-like transporter family	14	154	IPR000620	GO:0016020\|GO:0016021
	Mtr4g3230	380	PANTHER	WAT1-RELATED PROTEIN	13	366	IPR030184	GO:0016021\|GO:0022857

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr4g3230	Mtr-Chr4	45725428	45727721	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr4g3230	8	336	Nodulin-like Gene Family	AT1G68170	40.303	2.59e-77	241

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr4g3230	-		-	mtr:MTR_4g094360	542.347

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