Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3226 ATGAAGGAAGTATGTAACTCATTGCAAGGACTAAAACCAGTCATTGTTATGGTGTTTGTGCAGATTGCATATGCTGCTATGAATATCATGTGCAAGCTCGTTATAAATGATGGGATGAGTATGAGGGTTGCGACTGCTTACCGCCTCATTTGTGCATCAGCTTTCACTATTCCAGTTGCCCTTTTCTTTGACAGGAGGAAAAGACCAAAGATTACTTGGAAGGTGCTTTTTATGGCATTCCTATCTGGGTTGTTTGGGGGAAGTTTATTTATAAACCTTTATGCCGAGGGTATTGCTTTAACCTCAGCAACATTTATGCTAGCTATGTTCAACCTTACTCCAGGCATTACCTTCATCATGGCAATATTATTTGGATTGGAAAAATTGAATTGGAGTCTAGCAGAAGGAAAGGCTAAAGTGATGGGAACAGCAATTGGAATTAGTGGTGCGATGCTGATGACATTTTACAATGGAGCAGAAATCAATATTCGTTCATCAAATATTAACCTTTTGCATGCACATCAGAACCAAAATGGGCATATGGAGCCGCAACATGCAGACTTTAGTAATAAACTATTGGGCGTTCTATGTGCTATAGGAAGCAGCTGCTTTTTTTCTCTATGGTTTATCATTCAGGCTAAAATGAATAAAGAATATCCAAGCCATCACTCAAGCACAGCTTTGATGTCGACAATGGGAGCAATTCAAGCCATCGTTTTTGCTATTTGTGTGGACAGAGATTTGACCCAATGGAAGCTTGGTTACAATATCAGACTTCTCATGGTAGCTTATTCGGGAATTGTAATCTCTGGAATAGCTACAATTGTTATTGCTTGGTGCATAAAGATGAGAGGCCCTCTCTTTGCCTCTGTTTTCTATCCTCTTCAACTTTTACTTGTGGCTGTCTCTGCTTATCTGTTGTTGGATGAGAAGTTATATCTAGGAAGTATCCTTGGAGCAGTGTTGATCGTGTGCGGCCTATATATAGTGCTGTGGAGTAAGAACAAAGAAATGAAAGAAAAAGTTCAGGTTACGAGCATGGCCGGTCCAACATATTCTGAGGCATAA 1068 0.3989 MKEVCNSLQGLKPVIVMVFVQIAYAAMNIMCKLVINDGMSMRVATAYRLICASAFTIPVALFFDRRKRPKITWKVLFMAFLSGLFGGSLFINLYAEGIALTSATFMLAMFNLTPGITFIMAILFGLEKLNWSLAEGKAKVMGTAIGISGAMLMTFYNGAEINIRSSNINLLHAHQNQNGHMEPQHADFSNKLLGVLCAIGSSCFFSLWFIIQAKMNKEYPSHHSSTALMSTMGAIQAIVFAICVDRDLTQWKLGYNIRLLMVAYSGIVISGIATIVIAWCIKMRGPLFASVFYPLQLLLVAVSAYLLLDEKLYLGSILGAVLIVCGLYIVLWSKNKEMKEKVQVTSMAGPTYSEA* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3226 355 PANTHER WAT1-RELATED PROTEIN 8 347 IPR030184 GO:0016021|GO:0022857
Mtr4g3226 355 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 8 347 - -
Mtr4g3226 355 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Mtr4g3226 355 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020|GO:0016021
Mtr4g3226 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 336 - -
Mtr4g3226 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3226 Mtr-Chr4 45698635 45707307 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3226 11 340 Nodulin-like Gene Family AT1G25270 42.121 9.96e-92 277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3226 4 45698635 45707307 Mtr2g0112 2 1222256 1224889 PCT
Mtr2g0113 2 1233533 1236459 Mtr4g3226 4 45698635 45707307 PCT