Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3225 ATGAAGAGGATAATTTGCAATTCATTGCAAGGACTAAAACCAGTGGTGTTAATGGTGGTTTGCCAGATTGCATTTGCTGCTGTGAATATCATGTACAAGCTCGTCATAAACGATGGAATGAGCATGAGGGTGGCCACCGCTTACCGCCTCAGTTTTGCAGCGGCTTTCACTGTTCCCCTTGCTGTTTACTTTGATAGGAAGAAGAAACCAAAGATTACTTGGAAGGTTCTTTATATGACATTTCTTTGTGGATTGTTTGGGGGAAGTTTACTTCTAAACCTTTATGGCATGGGACTGACTTTTATTTCAGCAACGTTTATGATGTCATTGTACAACCTTATTCCAGGAGTTACCTTCATCATGGCCATATCCTTCGGATTGGAAAAGCTAAATTGGGGATTAGCAGAAGGAAAAGCCAAGGTAATAGGAACAATAATTAGCATCAGTGGGGCAATGGTGATGATATTTTACAGAGGAGTAGAAATTGATATTTGGACTTCCAATATAAACCTTATGCATCCACATCATAACCAAAATGGACTTATGGAACCACTACATGCCGACAATAAACTCTTGGGTATTCCATGTGCCATAGGAAGTTGTTGCTCTTTTTCTTTGTGGTTAATTATCCAGGCTAAGTTGAATGAAGAATTTCCAGAACACAATTCATGCTCAGCATTGGTGTGCACAATGGCAGCGATTCAAGCCATTGTTTTTGCTCTTTGTATCGATAGAGATTGGAATCAATGGAAGCTCGGTTACGATATCAGACTTCTTACTATTGCTTATTCGGGAATTGTAGCCTCTGGATTAGTGATTGTTGTTATTTCTTGGTGCATAAAGATGAGAGGTCCTATATTTACATCTGCTTTCAATCCTCTTCAGCTCTTACTTGTTGCTATCTCTGCCTATATATTGTTGGATGAGAAATTATATTTAGGAAGTGTCTTTGGAGCAGTGTTGATTGTATGTGGCATATATGCAGTACTTTGGAGTAAGAACAAAGAAATGAAAAAGAAGAATAAATCATCATCTTTAGAAATCAACATGGAGAATAAACCTGAGTTCGTTATACCCAGTCCTAACATTGCAGGTGCAGCTGTGAATATCATATGCAAGCTTGCCATAAATGATGGGATGAGCATGAGGGTGGCCACTGCTTACCGTCTCACTTTTGCATCAGCTTTCACCATTCCTCTTGCTCTTATCTTTGATAGGAAGGAAAGACCAAAGATTACTCGGAATGTGCTTTCTCTGGCATTTCTATGCGGATTGTTTGGTGTCATGTATTATTCCAGGGGAAGTTTATTTATGAATATGTTTGCCGAAGGCATGACTTTAACCTCATCAACATTTATGTTCGCTATGTTCAACCTTACTCCAGGCATTACCTTCATCATGGCAATATTCTTCGGATTGGAAAAACTAAATTGGAGTGTAGTAGAAGGAAAGGCTAAAGTGATAGGAACATTAATGGGGATTAGTGGGGCGATGGTGTTGACATTCTACAAAGGAGCAGAAATTAATATTTGGTCATCAAATATCAACCTTTTACATAATACACATCATCAGAACCAAAATGGGCATATGGAACTACAACATGCAGACTTCAGTAATAAACTATTGGGATTTCTATATGCCATAGGAAGCAGCTGCTCTTTTTCTCTTTGGTTTATCATTCAGGCAAAAATGAATAAAGAATATCCAAGCCATCACTCAAGCACGGCTTTGATGTCGACAATGGGAGCAATTCAAGCCATCGTTTTTGCTATTTGTGTGGACAGAGATTTGACCCAATGGAAGCTTGGTTACAATATCAGACTTCTCATGGTAGCTTATTCGGGAATTGTAGCCTCTGGAATAACTACTATTGTTATTGCCTGGTGCATAAAGATGAGAGGCCCTCTTTTTGCCTCTGTTTTCTATCCTCTTCAACTCCTACTTGTGTTTGTCGCTGCTAATCTATTGATAGATGAGAAATTATATTTAGGAAGTATTCTTGGAGCAGTGCTGATTGTGTGCGGCCTATATGTGGTGCTTTGGAGTAAGAGCAAAGAAATGAAAGAAAAAGTTCAGTTGACTAGCATGGCGGATCCAACCCATTTCGATACCTAA 2115 0.3901 MKRIICNSLQGLKPVVLMVVCQIAFAAVNIMYKLVINDGMSMRVATAYRLSFAAAFTVPLAVYFDRKKKPKITWKVLYMTFLCGLFGGSLLLNLYGMGLTFISATFMMSLYNLIPGVTFIMAISFGLEKLNWGLAEGKAKVIGTIISISGAMVMIFYRGVEIDIWTSNINLMHPHHNQNGLMEPLHADNKLLGIPCAIGSCCSFSLWLIIQAKLNEEFPEHNSCSALVCTMAAIQAIVFALCIDRDWNQWKLGYDIRLLTIAYSGIVASGLVIVVISWCIKMRGPIFTSAFNPLQLLLVAISAYILLDEKLYLGSVFGAVLIVCGIYAVLWSKNKEMKKKNKSSSLEINMENKPEFVIPSPNIAGAAVNIICKLAINDGMSMRVATAYRLTFASAFTIPLALIFDRKERPKITRNVLSLAFLCGLFGVMYYSRGSLFMNMFAEGMTLTSSTFMFAMFNLTPGITFIMAIFFGLEKLNWSVVEGKAKVIGTLMGISGAMVLTFYKGAEINIWSSNINLLHNTHHQNQNGHMELQHADFSNKLLGFLYAIGSSCSFSLWFIIQAKMNKEYPSHHSSTALMSTMGAIQAIVFAICVDRDLTQWKLGYNIRLLMVAYSGIVASGITTIVIAWCIKMRGPLFASVFYPLQLLLVFVAANLLIDEKLYLGSILGAVLIVCGLYVVLWSKSKEMKEKVQLTSMADPTHFDT* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3225 704 PANTHER WAT1-RELATED PROTEIN 12 355 IPR030184 GO:0016021|GO:0022857
Mtr4g3225 704 PANTHER WAT1-RELATED PROTEIN 362 696 IPR030184 GO:0016021|GO:0022857
Mtr4g3225 704 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 12 355 - -
Mtr4g3225 704 PANTHER MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN, PUTATIVE-RELATED 362 696 - -
Mtr4g3225 704 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 335 - -
Mtr4g3225 704 Pfam EamA-like transporter family 368 501 IPR000620 GO:0016020|GO:0016021
Mtr4g3225 704 Pfam EamA-like transporter family 14 155 IPR000620 GO:0016020|GO:0016021
Mtr4g3225 704 Pfam EamA-like transporter family 542 680 IPR000620 GO:0016020|GO:0016021
Mtr4g3225 704 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Mtr4g3225 704 SUPERFAMILY Multidrug resistance efflux transporter EmrE 599 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3225 Mtr-Chr4 45680692 45695582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3225 366 704 Nodulin-like Gene Family AT1G25270 40.762 9.54e-83 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3225 - - gsj:114424758 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3225 4 45680692 45695582 Mtr2g0114 2 1244647 1248346 PCT