Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3224 ATGTGTATATATAGTCCTTCAATCTCAAAAGCTTATTGCAGCCTGATCTTGAAGATGGGAAGCATGTCGAATTCATTGAAACCAGCCTTGCTAATGGTTGGGGTGCAGATGGTATTTTCTGCTTGCAATATTATCTACAAGCTTGCCATTTATGATGGAATGAATATCATAGTCATTGCAGCCTATCGTCTCGCCTTTGCAGCTGTTACTACTATTCCTCTTGCTCTTATTTTCGAAAGGAAGAGACCGAAGATGACTTGGAGAGTGTTTTACCTTTCACTTCTAAGTGGATTATTTGCCGGACTTTTATTTCAAAACCTATTCTACGGAGCTCTTGTTTTGACGTCAGCAACTCTTGTATCAGCTATCTACAACCTTATTCCCTCCGTCACTTTTGTTTTGGCCGTATCTTTCGGTTTCGAGGAATTAAATTGGGGAGCAGTAACGGGAAAGGCAAAGGTTGTAGGAACTATACTTGGATTTGCTGGGGCATTGGTGTTGACATTTTACAAAGGAGTAGAATTTGATATTTGGCCTTTTGCAATCAATATTTTGGATCCAAAGAACGACCACACGGAACATGTCACTGATACTACCACTGAATTGTTAGGTGTTCTATGTGTCTTACTCAGTTGCTTCTGTTTCTCAATCTGGCTCATCATTCAGGCTAAGATCAGTGAAGTATATCCATGCCCTCAATCAAGCATAGCTTTGATGTCTGTAATAGGAACAATACAATGTGTTATTTTCGGTTTTATTGTTGAGAGGGATTTGAACCAATGGAAACTTGGTTGGGATATCAGGCTCCTCACCGTTGTTTTTTCGGGAGTTTTTGCATCTGGAATAATGATTTTTGTCATGGCATGGGTCGTACAGAAGAAAGGACCTTTATATGCGTCTGCTTTCAACCCTCTAATGCTTTTGATTGTAGCTTTCGTCGCATCCATGCTCTTGGATGAGAAGTTAAACCTCGGAAGTATACTAGGAGGAGTGTTGATTGTTTGTGGCCTATACGCGGTGCTATGGGGTAAAGGTAGAGAAACACATAAGAAGATTGAATTAGAGCCCTCAGAAATCATTGGTGATTCCGAAGCTGCAAGGCCATTGTTGAGTCCATGA 1119 0.4066 MCIYSPSISKAYCSLILKMGSMSNSLKPALLMVGVQMVFSACNIIYKLAIYDGMNIIVIAAYRLAFAAVTTIPLALIFERKRPKMTWRVFYLSLLSGLFAGLLFQNLFYGALVLTSATLVSAIYNLIPSVTFVLAVSFGFEELNWGAVTGKAKVVGTILGFAGALVLTFYKGVEFDIWPFAINILDPKNDHTEHVTDTTTELLGVLCVLLSCFCFSIWLIIQAKISEVYPCPQSSIALMSVIGTIQCVIFGFIVERDLNQWKLGWDIRLLTVVFSGVFASGIMIFVMAWVVQKKGPLYASAFNPLMLLIVAFVASMLLDEKLNLGSILGGVLIVCGLYAVLWGKGRETHKKIELEPSEIIGDSEAARPLLSP* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3224 372 Pfam EamA-like transporter family 31 168 IPR000620 GO:0016020|GO:0016021
Mtr4g3224 372 Pfam EamA-like transporter family 203 341 IPR000620 GO:0016020|GO:0016021
Mtr4g3224 372 PANTHER WAT1-RELATED PROTEIN 27 365 - -
Mtr4g3224 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 261 347 - -
Mtr4g3224 372 PANTHER WAT1-RELATED PROTEIN 27 365 IPR030184 GO:0016021|GO:0022857
Mtr4g3224 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 62 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3224 Mtr-Chr4 45669619 45674200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3224 26 369 Nodulin-like Gene Family AT1G25270 40.462 3.61e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3224 - - mtr:MTR_4g094340 718.383