Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3222 ATGGCCGTTGGTACAATATGTGATTCTGAGTCACTAAACAAAGTAATCACAATTCCAAATCCTACAAAGGAAATGGAAGAAAAGCAAATAAAAATCAAAGAAAATTGTAAAACTTCAGATATTGATTATTGGCAAAGGGCTCAATGGCTTCGCGCAGCCGTATTAGGAGCTAATGATGGATTAGTTTCTGTTGCTTCACTAATGATGGGTGTAGGAGCTGTTAAAACAGACAGTGCAACAATGTTAGTCGCGGGTTTTGCGGGATTAATTGCAGGAGCATGTGGTATGGCAATAGGAGAATTTGTTTCTGTGTACACACAATATGAAGTTGAAATTGGTCAAATGATGAGAGATTTAGGAACAAGTGATAGAAAAGAGAAAGAATTGGAGATTGAGTTGGAGAAAAGAAGATCATTGCCTAATCCATTGCAAGCTGCTGCAGCTTCTGCATTCTCATTTTCTATTGGTGGTTTGGTTCCTTTACTTAGTGGTTCATTTATAAGAGTTTATAAGATTAGGATTATTGCGATTATGGCAATAGCTAGTTTGGCTTTGGTTGTGTTTGGAGGTGTTGGTGCTATGCTTGGTAAAACACCAAAGGTAAAATCTTCTATTAGGTTCCTTCTTGGTGGATGGATGGCTATGGCTATCACTTTTGGGTTAACCAAATTACTTGCACATTGTAGTGGTTTGGATTTGGAAATTTGA 708 0.3757 MAVGTICDSESLNKVITIPNPTKEMEEKQIKIKENCKTSDIDYWQRAQWLRAAVLGANDGLVSVASLMMGVGAVKTDSATMLVAGFAGLIAGACGMAIGEFVSVYTQYEVEIGQMMRDLGTSDRKEKELEIELEKRRSLPNPLQAAAASAFSFSIGGLVPLLSGSFIRVYKIRIIAIMAIASLALVVFGGVGAMLGKTPKVKSSIRFLLGGWMAMAITFGLTKLLAHCSGLDLEI* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3222 235 CDD Nodulin-21 48 200 - -
Mtr4g3222 235 Pfam VIT family 125 222 IPR008217 GO:0005384|GO:0030026
Mtr4g3222 235 Pfam VIT family 50 117 IPR008217 GO:0005384|GO:0030026
Mtr4g3222 235 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 226 IPR008217 GO:0005384|GO:0030026
Mtr4g3222 235 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3222 Mtr-Chr4 45659411 45660661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3222 34 225 Nodulin-like Gene Family AT3G43660 59.375 1.66e-77 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3222 K22736 - gmx:100810586 261.151