Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3220 ATGGCCTCACAAATTGGAGCAAGAACTAATGGGATCTCACCAAACAATTTCGAGGTTGAGATCCCTATCCATGCTAATAGTTCTCTCAAAGTTGAAAAAGAGAGCAACAACATTGATTACTTTCAAAGGGCACAATGGCTTAGAGCAGCCATGTTAGGAGCCAATGATGGACTAATCACCGTTGCATCGTTGATGATTGGTGTTGGAGCTATAAAAGAAGACATCAAAGTAATGCTCCTAGCTGGTTTCGCTGGTTTAGTAGCTGGTGCTTGTAGCATGGCAATTGGTGAGTTTGTTTCTGTTTATACTCAATATGACATTGAGATAGCTCAGATAAAAAGAGAAAGAGAAGCTAATAATAATAACAATGATGATGAAAGTAGTGAAAGGGAGAAATTGCCAAATCCATTTCAAGCAGCCCTAGCATCAGCACTTGCATTTTCTATTGGTGCAGTGATGCCATTGCTAGCAGCTGCATTTATAAAGAATCACAAAACCAGAATGGGTGTTGTTGCTGCTGTGGTTAGCTTTGCATTGTTGGTGTTTGGAGGAGTTGGTGCATTGGTTGGAAAAACTCCTTTGATGAGGTCTTGTGTTAGAGTTCTTATTGGAGGTTGGATGGCTATGGCCATTACTTTTGGTTTCACTAAATTGATTGGCAATACTGGACTTTGA 675 0.4015 MASQIGARTNGISPNNFEVEIPIHANSSLKVEKESNNIDYFQRAQWLRAAMLGANDGLITVASLMIGVGAIKEDIKVMLLAGFAGLVAGACSMAIGEFVSVYTQYDIEIAQIKREREANNNNNDDESSEREKLPNPFQAALASALAFSIGAVMPLLAAAFIKNHKTRMGVVAAVVSFALLVFGGVGALVGKTPLMRSCVRVLIGGWMAMAITFGFTKLIGNTGL* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3220 224 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 221 IPR008217 GO:0005384|GO:0030026
Mtr4g3220 224 Coils Coil 109 129 - -
Mtr4g3220 224 Pfam VIT family 129 216 IPR008217 GO:0005384|GO:0030026
Mtr4g3220 224 Pfam VIT family 47 126 IPR008217 GO:0005384|GO:0030026
Mtr4g3220 224 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3220 Mtr-Chr4 45651296 45652098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3220 26 224 Nodulin-like Gene Family AT3G43660 62.500 1.08e-91 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3220 K22736 - gmx:100802489 300.827