Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3218 ATGAAGAGACTGTGTTTTCTACATGCAACCCTTTCCTCATTTTCCTTTAATCTTGGTATCTTAAGATTTTTGTACTTCATGGCTTCTCTTGGTAACCATAATAACAATGAAGTTAATGACATAGAAGCAAAGCAAAACCAAACTCAAGACACTGAAGAAAACAACATTGACTATTCCAAAAGAGCACAATGGCTAAGAGCTGCTTTGTTAGGAGCCAATGATGGTTTGGTATCAATAACATCATTGATATTAGGTGTTGGAGCTGTGCATGAAGACATCAAAACAATGCTTCTAGCTGGATTTGCAGGACTAATTGCAGGAGCATGTAGTATGGGAATTGGAGAGTTTGTATCAGTGTACACTCAGTTTGACATAATGGTAGCTCAAATGAAAAGAGAGAACAAAATCAACAGCACTTTTGTTGAAGAGGAAAAGCAGCTACTACCAAATCCTTTTCAAGCTGCTATTGCATCAGCAATTGCATTTTCATTTGGTGCTACTGTTCCATTGTTAGGAGCAGCATTGGTAAGGGACTATAAGATAAGGTTGTTTGTTGTTGTTGGTATGGCTAGTTTTGCATTGTTGGTGTTTGGTGGTGTAGGAGCAATACTTGGTAAAACATCAGTGAAAATGTCTTGTGTTAGAGTGGTGGTTGGAGGTTGGATGGCTATGGCTATTACCTTTGGCTTAACCAAATTCGTTGGCTATAGTTCACTTTGA 720 0.3819 MKRLCFLHATLSSFSFNLGILRFLYFMASLGNHNNNEVNDIEAKQNQTQDTEENNIDYSKRAQWLRAALLGANDGLVSITSLILGVGAVHEDIKTMLLAGFAGLIAGACSMGIGEFVSVYTQFDIMVAQMKRENKINSTFVEEEKQLLPNPFQAAIASAIAFSFGATVPLLGAALVRDYKIRLFVVVGMASFALLVFGGVGAILGKTSVKMSCVRVVVGGWMAMAITFGLTKFVGYSSL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3218 239 Coils Coil 34 54 - -
Mtr4g3218 239 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 12 236 IPR008217 GO:0005384|GO:0030026
Mtr4g3218 239 Pfam VIT family 141 231 IPR008217 GO:0005384|GO:0030026
Mtr4g3218 239 Pfam VIT family 65 144 IPR008217 GO:0005384|GO:0030026
Mtr4g3218 239 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 12 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3218 Mtr-Chr4 45635150 45636568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3218 32 239 Nodulin-like Gene Family AT3G43660 59.330 1.61e-83 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3218 K22736 - gmx:100802489 253.062