Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3193 ATGGATTCTGCGATAACCGTCACCACGACGGCGCAGATGCTACTTTTCAGAGCACTCCACCGCCATTTCTCCGGAGCACCTCACCGCACACTCCTCCACCGTAACTTCAAACGCGCTGTTACTTCCTACAACAACCGCTTCCACATTCCGTGTTCCTCTGCCTCTTGTACTTCTACGCCGTCACTCCGTAACTTCGGCGCGCTGCTCTCACGAATACCGTGCCGTACGCGCTGCGTTTCGAGCTCCGCTGCTTCTTTTGGTTCTTCTGCCGGCGGTGGAAATGGAGGTGCTGGAGTTGGAAATGGAGGAGGAGGAGGTGGTAGTGGTTCTGGTGGTGAGTCTGGGGATGGCAGTGTAAAATTGGTTGGAGATGCTGCGCAAGAGGTTTCGTCTCTTTCGCCTGATGTTATCATTCTAGATGTTTCGGGAATGGTGTGTGGTGGATGTGCAGCATCTGTGAAGAGGATTCTGGAAAGTCAACCACAAGTGTCATCTGCTAGTGTAAATTTAACAACAGAGACGGCAATAGTTTGGCCTGTATCTGAAGCAAAAGCTGCAGCAAATTGGCAAAAGCAATTAGGGAAGACACTTGCCGAACATTTAACTAGCTGTGGTTTCAATTCTTGCCTCCGAGATTCAACAAGAGAAAACTTCATACAAATTTTTGAAAGAAAGATGGAAGAAAGAAATAAACTATTAAAAGAAAGTGGTCGTGAGCTAGCTGTTTCCTGGGCTCTTTGTGCTGTGTGTCTTGTTGGCCATCTCTCCCATCTCTTTGCAGCAAAGGCACCATGGATTCATGCATTTCATTCTGTCGGGTTTCATCTATCCTTGTGTTTGCTTACATTACTTGGTCCCGGCCGCCAACTTATCCTTGATGGCTTAAAAAGCCTTTTTAAAAGGGCGCCAAACATGAACAGCTTAGTTGGTCTTGGGGCTTTGTCATCATTCACAGTCAGTTCATTTGCTGTTTTGCTGCCGAAATTGGGTTGGAAGGCGTTTTTTGAGGAACCTATTATGCTGATTGCATTTGTCTTGTTGGGAAGGAATCTTGAGCAGAGAGCTAAAATTAAAGCAACCAGTGATATGACAGGACTTCTTAGCATATTGCCATCTAAAGCTCGCCTTCTAGTTAATAATGGGGAAACAGATGCTGCATCAGTTGTTGAGGTTCCTTCTGACAGTCTTTCTGTTGAAGACCAAATTATCATATTCCCCGGAGATCGTATTCCAGCTGATGGAATTGTGAGAGCTGGTAGAAGTAGTGTAGATGAGTCAAGTTTCACCGGGGAGCCGCTGCCAGTAACAAAAGAACTTGGGAGTGAGGTTGCAGCTGGAACTATAAATCTTAATGGAACTCTTACAATAGAGGTGCGGAGACCAGGTGGTGAGACTGCTATAGGAGACATTATTCGTCTAGTTGAAGAGGCACAAAGTAGAGAAGCTCCTATACAACGGTTGGCTGATAAGATAGCGGGATACTTCACGTATGGAGTAATGGCAATCTCTGTTACCACATTTACGTTTTGGAGTGTGTTCGGCCCGCAAATTATACCTACTGCTGTATATCAAGGAAGTTCAGTTTCACTTGCTTTGCAGCTTGCATGCAGTGTTCTGGTTATTGCTTGTCCTTGTGCACTTGGGTTAGCCACACCCACTGCTGTACTGGTTGGAACTTCTTTGGGGGCTAAAAGAGGATTACTTTTGCGTGGTGGAAACATTCTAGAGAAGTTTGCCATGGTAAATACCGTTGTGTTTGACAAAACAGGGACCCTCACGATTGGTAAACCTGTGGTGACAAAGATTGTCACGGGAACATGCATAGAAAATGCAAATTCAAGCCAAACTAAAATAAATGCTTTGTCTGATATTGAAGTTCTGAGGTTAGCAGCTGCTGTAGAGTCAAATTCAGTACATCCAGTTGGGAAAGCAATTGTGGATGCCGCTCAGGCAGTTAATTGCAATGATGCTAAGGTAGCAGATGAAACATTCCTGGAAGAACCTGGATCTGGTGTTGTTGCAACCGTAAATAACAGAAAGGTTTCGGTTGGGACATTGGAATGGATAACCAGGCATGGAGTTAACAACAGTGTACATCAAGAAGTGGAGTATAAAAACCAATCAATTGTCTATGTTGGAGTTGATGATACTTTGGCTGGTCAGATTTATTTTGAAGATGAGATAAGGAAAGATGCAAGACATGTCGTTGACACTTTATCTAAGCAAGATATTGATGTCTACATGCTGTCTGGAGACAAAAGGAATGCAGCTGAATATGTTGCATCTCTTGTCGGGATTCCCAAAGCCAAGGTGCTATCTGAAGTGAAGCCAGAGGAGAAAAATAAGTTCATAAAGGAACTTCAGAAAGATAAGAAAGTTGTAGCTATGGTTGGTGATGGAATTAACGATGCAGCTGCCCTGGCTTCTTCACATATAGGTATTGCATTGGGTGGAGGTGTTGGAGCTGCCAGTGAGGTGTCTTCTATTGTATTGATGCACAATCATCTCTCGCAGCTACTTGATGCTTTGGAGCTTAGCAGGCTAACCATGAATACTGTAAAGCAAAATCTTTGGTGGGCTTTCGTATACAACATTGTAGGGATTCCAATTGCAGCTGGAGTGCTATTTCCTATAAATGGTACCATGCTGACTCCATCAATTGCAGGGGCTCTCATGGGGTTGAGTTCCATTGGCGTAATGACTAACTCATTACTTTTGAGATTCAAGTTCTCCTTAAAGCAAAAACATATACACGGCATATTGCCAATCATCAAAACCTATGTTGAATCTGATCTGGCTCGCCAAAACAAGAAAATGAAGTATCCAAATTAG 2832 0.44 MDSAITVTTTAQMLLFRALHRHFSGAPHRTLLHRNFKRAVTSYNNRFHIPCSSASCTSTPSLRNFGALLSRIPCRTRCVSSSAASFGSSAGGGNGGAGVGNGGGGGGSGSGGESGDGSVKLVGDAAQEVSSLSPDVIILDVSGMVCGGCAASVKRILESQPQVSSASVNLTTETAIVWPVSEAKAAANWQKQLGKTLAEHLTSCGFNSCLRDSTRENFIQIFERKMEERNKLLKESGRELAVSWALCAVCLVGHLSHLFAAKAPWIHAFHSVGFHLSLCLLTLLGPGRQLILDGLKSLFKRAPNMNSLVGLGALSSFTVSSFAVLLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSILPSKARLLVNNGETDAASVVEVPSDSLSVEDQIIIFPGDRIPADGIVRAGRSSVDESSFTGEPLPVTKELGSEVAAGTINLNGTLTIEVRRPGGETAIGDIIRLVEEAQSREAPIQRLADKIAGYFTYGVMAISVTTFTFWSVFGPQIIPTAVYQGSSVSLALQLACSVLVIACPCALGLATPTAVLVGTSLGAKRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGKPVVTKIVTGTCIENANSSQTKINALSDIEVLRLAAAVESNSVHPVGKAIVDAAQAVNCNDAKVADETFLEEPGSGVVATVNNRKVSVGTLEWITRHGVNNSVHQEVEYKNQSIVYVGVDDTLAGQIYFEDEIRKDARHVVDTLSKQDIDVYMLSGDKRNAAEYVASLVGIPKAKVLSEVKPEEKNKFIKELQKDKKVVAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIVLMHNHLSQLLDALELSRLTMNTVKQNLWWAFVYNIVGIPIAAGVLFPINGTMLTPSIAGALMGLSSIGVMTNSLLLRFKFSLKQKHIHGILPIIKTYVESDLARQNKKMKYPN* 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3193 943 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 305 906 IPR027256 GO:0006812|GO:0016021|GO:0019829
Mtr4g3193 943 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 630 878 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g3193 943 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 343 607 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr4g3193 943 Pfam E1-E2 ATPase 369 565 - -
Mtr4g3193 943 ProSiteProfiles Heavy-metal-associated domain profile. 136 210 IPR006121 GO:0046872
Mtr4g3193 943 Gene3D - 576 847 IPR023214 -
Mtr4g3193 943 TIGRFAM ATPase-IB1_Cu: copper-translocating P-type ATPase 287 907 - -
Mtr4g3193 943 Gene3D - 355 478 - -
Mtr4g3193 943 SFLD p-type atpase 568 847 IPR044492 -
Mtr4g3193 943 SUPERFAMILY HMA, heavy metal-associated domain 137 184 IPR036163 GO:0046872
Mtr4g3193 943 SUPERFAMILY HAD-like 583 903 IPR036412 -
Mtr4g3193 943 SUPERFAMILY Calcium ATPase, transduction domain A 387 474 IPR008250 -
Mtr4g3193 943 PRINTS Copper-transporting ATPase signature 290 309 - -
Mtr4g3193 943 PRINTS Copper-transporting ATPase signature 338 357 - -
Mtr4g3193 943 PRINTS Copper-transporting ATPase signature 497 511 - -
Mtr4g3193 943 PRINTS Copper-transporting ATPase signature 774 791 - -
Mtr4g3193 943 Gene3D - 136 212 - -
Mtr4g3193 943 CDD HMA 139 195 IPR006121 GO:0046872
Mtr4g3193 943 ProSitePatterns E1-E2 ATPases phosphorylation site. 587 593 IPR018303 -
Mtr4g3193 943 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Mtr4g3193 943 PRINTS P-type cation-transporting ATPase superfamily signature 585 599 - -
Mtr4g3193 943 PRINTS P-type cation-transporting ATPase superfamily signature 742 752 - -
Mtr4g3193 943 PRINTS P-type cation-transporting ATPase superfamily signature 797 816 - -
Mtr4g3193 943 PRINTS P-type cation-transporting ATPase superfamily signature 820 832 - -
Mtr4g3193 943 Gene3D - 596 728 IPR023299 GO:0000166
Mtr4g3193 943 Pfam haloacid dehalogenase-like hydrolase 581 809 - -
Mtr4g3193 943 SUPERFAMILY Calcium ATPase, transmembrane domain M 339 883 IPR023298 -
Mtr4g3193 943 ProSitePatterns Heavy-metal-associated domain. 141 170 IPR017969 GO:0046872
Mtr4g3193 943 SFLD Haloacid Dehalogenase 568 847 - -
Mtr4g3193 943 PANTHER ATP7, ISOFORM B 73 908 - -
Mtr4g3193 943 CDD P-type_ATPase_Cu-like 238 908 - -
Mtr4g3193 943 Pfam Heavy-metal-associated domain 139 183 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3193 Mtr-Chr4 45390174 45406699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3193 287 918 Primary Pumps ATPases AT1G63440 39.357 9.94e-127 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3193 K17686 - gmx:100796210 1409.05