Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3191 ATGACGGAGCGTTCTTCTCCCGAAATGGCTCTTCGATTAGATTTTAAGCAGTTACAGTTTGAAGCACAGCATCGATGGTTACGCCCTGCAGAGATATTAGGAATTCTCAGCAACTATCAGATGTTTGAAATCTCAAAAGAACCGCCTACCCGGCCACCGAGTGGATCGCTTTTTCTTTTCAATCGGAAAATTTTGAGGCACTTTAGAAGGGATGGATACAATTGGCGAAAGAAGAACGATGGAAAAACTGTGAAGGAAGCTCATGAGAAGTTGAAGGTGGAAGGTAGCGATAAGATACACTGCTACTACGCCCATGGAGAAGATAATGAAAATTTCCAGAGGCGAAGTTATTGGAGGCTTGAACCGGATATGATGGATATAGTATTTGTCCACTACTTGGATGTTAAGGTTAACAAGAGCAATGTAGGCATAAGTACAGATACTAAGGAGGTTACATCAGATTCCCAAAAGGGCAGTTCTACGTCATCTGGCTTTCCTGCAAATTACGGTAACATGCGTTCAAGAAATATGGATTCCATGAGCCCAACAAGCACTTTAACTTCTTTATGTGAAGATGCTGATTCAGAGGATATTCACCAAGCAAGCTCAGTGTTTCGCACCTTTCATGAGTTGCATAATCCGGGAAATGGTCCACAGACGGATAAGATTGGTGCTCATTCAAATGGTCCAAATCTTATGCACCCCTTTTCAGGATCAAATTACCTCCCACTTGTTCAGGGGGGTAAATTCAATTCAAACGAGGGTCAGAGAGCACTCGACATAGGGTCCTGGGACAATGTCATGGATAAATCTTCAGGAACGCATACCGATCCTTCCCCTGTATCATCCTATTCTTTTCCATCAAGTTCAATGTCTGTCTTCAATGAAGGAAGTGGCTCACAGTCTCTACAATCAAATTGGCAGAACCCTTTTGAAGAAAATGCGGGCGGATTTCCAAAGTGGAGCTTTACTCAGTCGTTAAGCATGGAATTTGAATCTAACTATTCCGCTGAACTACTGGGTTTGGGTAAAGAAACTGGTTATGCAAGTCCAGAAATTGATCCTGACCTATTTTCTTTTGATTTTGAGCCAAAAGAGCAGTCTGTGCATCAAAACTTGCACACGGAGCATGCTTCTATGAATGCTAAAGAGAGCCTGACGAAGGTTGACAGCTTCTCTAAATGGATTAAAGAATTTGCATCAGTGGATGATCTGCACATGCAGTCTTCCCCTGATATTTCATGGGGCACGGATGAATGTGGAAATGTGATAGATGATACCTCATTGGACCTGTCTCTATCTCAAGACCAGCTGTTTAGCATACATGACTTTTCACCTAAATGGGCTTATGCTGATTCAGAAATTGAGGTGTTGATTATTGGAACATTTGTGAATAGTAGACCAGAGGTGACAACGTGTAACTGGTCCTGTATGTTTGGGGAAGTGGAAGTTCCAGCTACGATTTTAGCTAATGGAATTCTGAGCTGTCAAGCTCCACCTCATGAGATTGGACGGGTTCCTTTCTACGTAACCTTCTCCAATAGATTTGCTTGTAGTGAAGTTCAGGAATTTGAGTACAAAGAGGGCTTTACCAGAAATGTAGATTTGGCAGATTTTTTTAACAACTCAACTGAAATGCGACATCATTTGCATCTGGAGGAGTTACTTACTTTGGATTCAGTGCATCTTTCAGATCAAGTTCTTGAGGTTGATATGGAGAAAAGTAACATGATTCATAAGCTTATTTCACTAAAAGAGAAAGATGAATATTCGTGTAATGAAGAGCCAACTGGAGAGATGGATATTTCAAAACACAGGTTGAAGGCACATATCTTTCATAGGCAGGTTAAGGAGAAGCTGTACTCATGGCTTCTTCACAAAGTAACTGAAACTGGTAAAGGGCCTCATGTGTTTGGTAAAGATGGGCAAGGTGTACTACATTTAGTTGCTGCTCTTGGTTATGATTGGGCCATAGCACCAATTGTAACTTCTGGAGTTAATATCAACTTCCGTGATGTGAATGGATGGACGGCTCTACACTGGGCTGCATCATGTGGCAGAGAGAGAACGGTTGCTCTCCTTGTCTCCATGGGTGCAGCTGCTGGAGCGTTGACAGATCCATGTCCAGCATTCCCTTCAGGAAGAACGCCTGCAGATCTTGCTTCTGGTGATGGCCAGAAAGGAATTTCAGGTTTTCTTGCCGAGTCATTATTAACTAGCCACCTTGAATCACTCACAATGGATGATGTGAATAAAGATGGCACAAAAGAAACTTTAGGGATGAAAGCAGTACAGACGATTTCAGAACGAATTGCAACGCCTGTGCACTGGGGAGATATGCAAGATGCTATATGCCTTAAGGATTCTCTTGATGCTGTCCGTAATGCTACACAAGCCGCTGATAGAATACATCAAGTATTTAGAATGCAATCATTTCAAAGAAAGCAGCTAGCTCAGTATGAAGAGGATGGTGAGGAGTTTGGATTGTCAGATCAGCAAGCTCTTTCGCTTCTAGCTTCTAAGGCATCCAAATCTGGACATGGGGAGGGTTCAGCCAATGCTGCTGCAGTACAAATACAGAAAAAGTTCCGTGGCTGGACAAAGAGAAAAGAATTCTTGTTCATTCGTCAAAGAGTTGTCAAAATCCAGGCCCATGTAAGAGGTCACCAGGTAAGAAAGAAGTACAAACCAATCATTTGGTCCGTGGGAATCCTGGAGAAGGTTATATTACGGTGGAGGCGTAAGGGCAGTGGTTTACGTGGATTTCGATCAGATGCCATTAATAAGGTCCCCAACCAACCAACCAGCCTTCCCGAAAAGGAGGATGACTATGATTTTCTCAAGGAAGGGAGGAAACAGAGTGAACAAAAGTTTCAAAAGGCCCTTTTAAGGGTTAAGTCCATGGTTCAGTATCCAGAAGCTCGGGCCCAATACAGGCGTCTGCTAAATGTAGTGGACGATTACCGTCAAACCAAGACATGTAATCTGAGTTCGATAAGTTCGGAAGAGGCAGCTGATGGTGTGGAGGATTTGGTTGACATTCAAATGCTTTTTAATGATGACAACTTTGTACCTATGTCATTTGATTGA 3090 0.4262 MTERSSPEMALRLDFKQLQFEAQHRWLRPAEILGILSNYQMFEISKEPPTRPPSGSLFLFNRKILRHFRRDGYNWRKKNDGKTVKEAHEKLKVEGSDKIHCYYAHGEDNENFQRRSYWRLEPDMMDIVFVHYLDVKVNKSNVGISTDTKEVTSDSQKGSSTSSGFPANYGNMRSRNMDSMSPTSTLTSLCEDADSEDIHQASSVFRTFHELHNPGNGPQTDKIGAHSNGPNLMHPFSGSNYLPLVQGGKFNSNEGQRALDIGSWDNVMDKSSGTHTDPSPVSSYSFPSSSMSVFNEGSGSQSLQSNWQNPFEENAGGFPKWSFTQSLSMEFESNYSAELLGLGKETGYASPEIDPDLFSFDFEPKEQSVHQNLHTEHASMNAKESLTKVDSFSKWIKEFASVDDLHMQSSPDISWGTDECGNVIDDTSLDLSLSQDQLFSIHDFSPKWAYADSEIEVLIIGTFVNSRPEVTTCNWSCMFGEVEVPATILANGILSCQAPPHEIGRVPFYVTFSNRFACSEVQEFEYKEGFTRNVDLADFFNNSTEMRHHLHLEELLTLDSVHLSDQVLEVDMEKSNMIHKLISLKEKDEYSCNEEPTGEMDISKHRLKAHIFHRQVKEKLYSWLLHKVTETGKGPHVFGKDGQGVLHLVAALGYDWAIAPIVTSGVNINFRDVNGWTALHWAASCGRERTVALLVSMGAAAGALTDPCPAFPSGRTPADLASGDGQKGISGFLAESLLTSHLESLTMDDVNKDGTKETLGMKAVQTISERIATPVHWGDMQDAICLKDSLDAVRNATQAADRIHQVFRMQSFQRKQLAQYEEDGEEFGLSDQQALSLLASKASKSGHGEGSANAAAVQIQKKFRGWTKRKEFLFIRQRVVKIQAHVRGHQVRKKYKPIIWSVGILEKVILRWRRKGSGLRGFRSDAINKVPNQPTSLPEKEDDYDFLKEGRKQSEQKFQKALLRVKSMVQYPEARAQYRRLLNVVDDYRQTKTCNLSSISSEEAADGVEDLVDIQMLFNDDNFVPMSFD* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3191 1029 SMART iq_5 851 873 IPR000048 GO:0005515
Mtr4g3191 1029 SMART iq_5 874 896 IPR000048 GO:0005515
Mtr4g3191 1029 CDD IPT 440 528 - -
Mtr4g3191 1029 MobiDBLite consensus disorder prediction 147 187 - -
Mtr4g3191 1029 SMART CG_1_2 18 136 IPR005559 GO:0003677
Mtr4g3191 1029 Pfam IQ calmodulin-binding motif 877 896 IPR000048 GO:0005515
Mtr4g3191 1029 Pfam IQ calmodulin-binding motif 854 872 IPR000048 GO:0005515
Mtr4g3191 1029 SUPERFAMILY E set domains 441 526 IPR014756 -
Mtr4g3191 1029 ProSiteProfiles IQ motif profile. 875 899 IPR000048 GO:0005515
Mtr4g3191 1029 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 1029 - -
Mtr4g3191 1029 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Mtr4g3191 1029 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 1029 - -
Mtr4g3191 1029 SUPERFAMILY Ankyrin repeat 625 734 IPR036770 -
Mtr4g3191 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 853 902 IPR027417 -
Mtr4g3191 1029 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Mtr4g3191 1029 Gene3D - 613 733 IPR036770 -
Mtr4g3191 1029 ProSiteProfiles IQ motif profile. 852 881 IPR000048 GO:0005515
Mtr4g3191 1029 Gene3D Immunoglobulins 434 529 IPR013783 -
Mtr4g3191 1029 ProSiteProfiles Ankyrin repeat region circular profile. 674 699 - -
Mtr4g3191 1029 Gene3D - 852 898 - -
Mtr4g3191 1029 ProSiteProfiles Ankyrin repeat profile. 674 706 IPR002110 GO:0005515
Mtr4g3191 1029 Pfam IPT/TIG domain 441 526 IPR002909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3191 Mtr-Chr4 45360834 45369712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3191 1 1010 CAMTA Transcription Factor Family AT5G64220 49.859 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mtr4g3191 CG-1 8.5e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3191 K21596 - gmx:100795682 1420.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3191 4 45360834 45369712 Mtr2g0162 2 1655858 1669217 PCT