Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3189 ATGGATAGTCTTTGTTGCTTCAGCTCCAGTCAGGGGCGTTCTTCATGCAACTCTGGCAAAGGCAAGAGCAGTCAGTCGCCGGTCAAATATGGCTTCAGCCTTGTTAAAGGGAAAGCCAACCATCCAATGGAGGACTATCACGTAGCAAAAATTGTCCATTTCAAAGGACAAGAGCTAGGACTTTTTGCTATATACGATGGACACCTGGGAGACAGTGTACCGTCATATTTGCAAAAGCATCTCTTTTCTAATATCTTGAAGGAAGACGACTTCTGGAACGATCCATTCATGTCCATTTCTAAAGCTTATGAGTCGACAGATCAGGCAATTCTTACTCACAGTCCTGATTTGGGGCGAGGAGGATCAACTGCCGTGACTGCAATTCTCATAAATAATCAGAAACTATGGGTCGCCAATGTTGGAGATTCCCGAGCAGTTCTATCAAGGGGAGGGGTAGCGGTACAAATGTCTACCGATCATGAACCTAATACGGAACGTGGCAGCATTGAGAACAGAGGCGGCTTTGTCTCAAACATGCCAGGAGATGTTGCTAGAGTGAACGGGCAGCTTGCAGTTTCTCGAGCATTTGGAGACAAAAACCTCAAAACACACCTGAGATCCGATCCTGACATTCAGTATGCTGATGTTAACCAAGATACTGAGTTTTTGATACTTGCTAGCGATGGTCTATGGAAGGTAATGGCGAATCAAGAAGCCGTTGATATTGCAAAAAAGATAAAGGATCCACAAAAGGCAGCTAAACAACTAGCTACTGAGGCATTGAACAGAGACAGTAAGGATGATATTTCCTGCGTTGTAGTTCGTTTCAAGGGATGA 837 0.4456 MDSLCCFSSSQGRSSCNSGKGKSSQSPVKYGFSLVKGKANHPMEDYHVAKIVHFKGQELGLFAIYDGHLGDSVPSYLQKHLFSNILKEDDFWNDPFMSISKAYESTDQAILTHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSRGGVAVQMSTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYADVNQDTEFLILASDGLWKVMANQEAVDIAKKIKDPQKAAKQLATEALNRDSKDDISCVVVRFKG* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3189 278 SUPERFAMILY PP2C-like 24 277 IPR036457 -
Mtr4g3189 278 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 9 277 - -
Mtr4g3189 278 Gene3D - 8 278 IPR036457 -
Mtr4g3189 278 ProSiteProfiles PPM-type phosphatase domain profile. 29 276 IPR001932 -
Mtr4g3189 278 MobiDBLite consensus disorder prediction 1 27 - -
Mtr4g3189 278 CDD PP2Cc 28 276 IPR001932 -
Mtr4g3189 278 Pfam Protein phosphatase 2C 38 269 IPR001932 -
Mtr4g3189 278 PANTHER PROTEIN PHOSPHATASE 2C 9 277 IPR015655 GO:0004722|GO:0006470
Mtr4g3189 278 SMART PP2C_4 25 274 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3189 Mtr-Chr4 45334836 45339861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3189 1 277 PP2C-type Phosphatase Gene Family AT1G22280 70.732 1.53e-145 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3189 K17506 - gmx:100801722 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3189 4 45334836 45339861 Mtr2g0163 2 1672516 1675981 PCT