Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3182 ATGGCTCTAGAGATTGAAAGCACAAGAGAGGAGGTAGGAGCATCAAAAAAGATGAATGGAGGAGAAGAGAAGGGAGTTTGTTTAACTTGGAAGGATTTATGGGTGACTGTTTCTGCTTCAACAGGAAAAACCAATGAAAGCAAATCAATTCTTCAGGGTCTAACTGGTTATGCAAAACCAGCTCAGCTTTTGGCTATTATGGGTCCTTCTGGTTGTGGAAAATCTACACTTCTTGATGCTTTAGCAGGGAGATTAGGTTCAAACACAAGACAATCAGGGGATATTTTGATCAATGGCAACAAACAAGCATTGGCTTATGGAACCTCGGCATATGTGACACAAGATGATACTCTATTAACAACCTTAACCGTTAAAGAAGCAGTGTACTATTCAGCTCAACTTCAATTACCTGACACAATGTCTAATGAAGAGAAAAAAGAAAGAGCTGATTTTACAATAAGAGAAATGGGTCTGCAAGATGCAATCAACACAAGAATAGGAGGGTGGGGTGTTAAAGGAATAAGTGGGGGTCAAAAAAGGAGAGTTAGCATTTCCATTGAGATTCTTACACGTCCAAGACTTCTATTTCTTGATGAACCAACTAGTGGACTTGATAGTGCTGCTTCTTACTATGTTATGAAAAGAATAGCTTCCTTGGACAAAAAGGATGGAATTCAAAGGACCATTGTTGCCTCAATCCATCAACCAAGTACTGAAGTTTTTCAACTTTTCCATAATCTTTGTCTTTTGTCTTCTGGTAAAACAGTTTACTTTGGACCTGCTTCTGCTGCATCTGAGTTTTTTGCTTCAAATGGTTTTCCTTGTCCTCCCCTACAAAATCCATCCGATCATTTACTTAAAACTATAAACAAGGATTTTGATCAGGATATTGAGATGGATTTATCAGAGACTGGAACAATTTCCATAGAACAAGCAATTGATATCCTTGTGAGCTCATATTCTTCATCCGAAAGAAACCAAGAAATTAAAAATGAAGTATCAGTATTGTCTATAGTATTGTCTTTAAAGGATAATAATTCAACATACAAGAAAAAACATGCTGGCTTCCTCAATCAGTGCTTAGTTCTTACCAGAAGATCTTTTGTGAACATGTTTCGTGATCTTGGCTATTATTGGTTACGCCTTGGCATATATATTGCATTGGCTATAAGTTTAGCCACTGTCTTTAATGATTTGGATAAAAGTAATGGCTCAATTCAGGATAGAGGTTCACTTCTTATGTTTGTGTTTTCATTCCTAACTTTCATGACCATTGGTGGATTCCCTTCTTATGTGGAGGATATGAAGGTATTTGAACGTGAAAGACTAAATGGACACTATGGTGTTACTGCATATGTAATTGGAAACACACTTTCAGCTATTCCATATTTGTTGATGATTTCCCTCATTCCTGGAGCTATAGCATATTACCCTCCAGGTCTTCAAAAAGGATTTGAGCACTTCATATATTTTATCTGTGCTCTATTTTCTTGTCTAATGTTAGTGGAGAGTCTTATGATGATAGTTGCAAGCATTGTTCCTGATTTTCTAATGGGAATTATAACTGGTGCTGGAATTCAAGGAATCATGATGTTGGCTGGTGGATTCTTTAGATTGCCAAATGATCTTCCTAATCCATTTTGGAGATACCCTATGTTCTATATTTCCTTTCATAGGTATGCTTTTCAAGGATCCTATAAAAATGAGTTTGAAGGACTAAAATTTGAAAGAGATGAAATTGGTGGATCACTCAATTACATTAGTGGTGAAGAGATTCTAAGAAATAAATTTCATGTAGATATGAGTTACTCAAAGTGGGTTGATCTTGGAGTATTGTTGGGTATGATTGTTCTATATCGAGTTGTGTTTTTGATTATTATCAAAACTACTGAGAAGCTTAAACCTATTGTTATGTCATTTATGTCGGTGTCTCCTAGGCAAACAAGACAAATCTTGGAGAATCCTACTGCCACTCCTTTACATGTAGAAGTTGTATAA 1998 0.3624 MALEIESTREEVGASKKMNGGEEKGVCLTWKDLWVTVSASTGKTNESKSILQGLTGYAKPAQLLAIMGPSGCGKSTLLDALAGRLGSNTRQSGDILINGNKQALAYGTSAYVTQDDTLLTTLTVKEAVYYSAQLQLPDTMSNEEKKERADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSISIEILTRPRLLFLDEPTSGLDSAASYYVMKRIASLDKKDGIQRTIVASIHQPSTEVFQLFHNLCLLSSGKTVYFGPASAASEFFASNGFPCPPLQNPSDHLLKTINKDFDQDIEMDLSETGTISIEQAIDILVSSYSSSERNQEIKNEVSVLSIVLSLKDNNSTYKKKHAGFLNQCLVLTRRSFVNMFRDLGYYWLRLGIYIALAISLATVFNDLDKSNGSIQDRGSLLMFVFSFLTFMTIGGFPSYVEDMKVFERERLNGHYGVTAYVIGNTLSAIPYLLMISLIPGAIAYYPPGLQKGFEHFIYFICALFSCLMLVESLMMIVASIVPDFLMGIITGAGIQGIMMLAGGFFRLPNDLPNPFWRYPMFYISFHRYAFQGSYKNEFEGLKFERDEIGGSLNYISGEEILRNKFHVDMSYSKWVDLGVLLGMIVLYRVVFLIIIKTTEKLKPIVMSFMSVSPRQTRQILENPTATPLHVEVV* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3182 665 Pfam ABC-2 type transporter 359 570 IPR013525 GO:0016020|GO:0140359
Mtr4g3182 665 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 28 277 IPR003439 GO:0005524
Mtr4g3182 665 Pfam ABC transporter 52 202 IPR003439 GO:0005524
Mtr4g3182 665 Gene3D - 34 299 IPR027417 -
Mtr4g3182 665 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 266 IPR027417 -
Mtr4g3182 665 ProSitePatterns ABC transporters family signature. 174 188 IPR017871 GO:0005524
Mtr4g3182 665 Pfam ABC-2 type transporter 234 289 IPR043926 GO:0140359
Mtr4g3182 665 SMART AAA_5 60 303 IPR003593 -
Mtr4g3182 665 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 6 661 - -
Mtr4g3182 665 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 6 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3182 Mtr-Chr4 45265980 45269588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3182 50 262 Calmodulin-binding Proteins AT2G36910 28.767 1.67e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3182 K05681 - gmx:100813462 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3182 4 45265980 45269588 Mtr4g3182 4 45265980 45269588 ECH