Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3179 ATGGGTGGTCATGAGGGAGAAAAGGGTGGAATTACTGTGACCTGGGAGAATTTGGAGGCCATTGTTACAAATGGAAAGAATAGAAAACTAATTCTGCATGGACTTACAGGTTATGCTCAGCCAGGGAAGCTTTTGGCAGTAATGGGTCCTTCAGGCTGTGGCAAATCCACACTCCTTGATGCTTTAGCAGGAAGGTTGAAATCAAACATACAGCAATCAGGGAAAATTCTAATCAATGGCAAAAAACAAGCACTGGCTTATGGAACATCGGGCTACGTAACACAAGATGATGCTATGCTGTCAACTTTAACAGCTGGTGAAACTTTATACTACTCAGCTCAACTTCAATTTCCAAACTCAATGTCTATAGCAGAGAAGAAGAGGCAAGCAGACATCACACTCGCAGAAATGGGCCTGCAGGATGCTATTAACACAAGGGTTGGAGGGTATGGTTCCAAAGGCCTAAGCGGGGGGCAAAGAAGGAGACTAAGCATTTGCATTGAGATTCTAACTCACCCTAGACTTCTTTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTACTATGTTATGAGCAGGATCGCAAGTTTAAGTCTAAGGGATGATATTCAAAGGACAATTGTTGCATCCATACATCAGCCTAGTAGTGAAGTTTTTCAACTTTTTGATGACCTCTGTCTTCTTTCCTCTGGGGAGACGGTATATTTTGGTACAGCATCTGAAGCAAATCAGGTTTTTGCTTCAAATGGTTTCCCTTGCCCAACTCACTATAATCCTTCTGATCACTACTTAAGGATCATAAACAATGATTTTGAACAGGACACTGAAGAAGGCTTTGGTAAAGGAGTAATTACTGAAGACGCAATTGGTATCCTTGTAAATTCTTATAAAGAATCTGAAATTAAACGTCAAGTTTTGATTGAAGTTGCAAAAATAAGTGAAAGAGATTTGAGTGCAATAAGGAATAGGAGGACCCATGCTCCATTTCAGACTCAGTGCATGGTTCTTATAAAAAGATCGTCCCAACAATTGTATCGTGATATCAGCAATTACTGGTTACGTCTTGTAGTCTTTGTTGCCATTGCTATAAGCCTAGGCTCTATCTTTTACCAAGTCGGTTCAAGTACTCGATCTATTCAGGTTAGAGGATCGCTACTTTCATTTTTTATGTCAGTTTTGACTTTCATGACACTCGTTGGTGGATTCTCTCCCTTGATTGAGGAAATGAAGGTATTTAAACGAGAGAGATTAAATGGGCACTATGGTATTACTGCTTTTCTCATTGGCAATATATTATCTTCTATTCCATACATGGTAATGATCTCTCTCATTTCCGGATCAATAGTGTGTTACCTTTCTGGACTACACAAAGGACTAGAGCACTATCTATACTTTGCTTCTATCCTATTTGCCATTATGATGTGGGTTGAGAGCCTTATGATGGTTGTGGGGAGTATCTTCCCAAATTTTGTGATGGGGGTGATCATTGCTGGTGGAGTTGAAGGACTTGCGATTTTAACAGGTGGATTCTATCGAATTCCTAGTGATCTTCCAAAGCCATTATGGAAGTACCCTTGCTACTACATTTCCTTCCTCACTTATGCTTTTCAAGGATCCTTCAAGAATGAATTTGAAGGCTTAACATTTGTTGGGTATCAAGAAGGAGGTACCATAACCGTTAGCGGTAGAGATGTACTAACAGATATATGGCATGTGCAAATAGGTCACTCGAAGTGGGTTGATCTTTTTATCATGTTTGGTATGATTGTTGTTTATCGAGTTCTATTCTTGGTCATCAATAAGGTCAAGGAGAAGTCAAACCCCGCTGTTCCGTCCATAAATCGATCCCAAGCAAAAACTTTCTCTAGAACCAATATGGATGAACTCTAA 1899 0.4007 MGGHEGEKGGITVTWENLEAIVTNGKNRKLILHGLTGYAQPGKLLAVMGPSGCGKSTLLDALAGRLKSNIQQSGKILINGKKQALAYGTSGYVTQDDAMLSTLTAGETLYYSAQLQFPNSMSIAEKKRQADITLAEMGLQDAINTRVGGYGSKGLSGGQRRRLSICIEILTHPRLLFLDEPTSGLDSAASYYVMSRIASLSLRDDIQRTIVASIHQPSSEVFQLFDDLCLLSSGETVYFGTASEANQVFASNGFPCPTHYNPSDHYLRIINNDFEQDTEEGFGKGVITEDAIGILVNSYKESEIKRQVLIEVAKISERDLSAIRNRRTHAPFQTQCMVLIKRSSQQLYRDISNYWLRLVVFVAIAISLGSIFYQVGSSTRSIQVRGSLLSFFMSVLTFMTLVGGFSPLIEEMKVFKRERLNGHYGITAFLIGNILSSIPYMVMISLISGSIVCYLSGLHKGLEHYLYFASILFAIMMWVESLMMVVGSIFPNFVMGVIIAGGVEGLAILTGGFYRIPSDLPKPLWKYPCYYISFLTYAFQGSFKNEFEGLTFVGYQEGGTITVSGRDVLTDIWHVQIGHSKWVDLFIMFGMIVVYRVLFLVINKVKEKSNPAVPSINRSQAKTFSRTNMDEL* 633
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3179 632 CDD ABCG_EPDR 10 240 - -
Mtr4g3179 632 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 13 258 IPR003439 GO:0005524
Mtr4g3179 632 Pfam ABC transporter 33 183 IPR003439 GO:0005524
Mtr4g3179 632 ProSitePatterns ABC transporters family signature. 155 169 IPR017871 GO:0005524
Mtr4g3179 632 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 7 632 - -
Mtr4g3179 632 SMART AAA_5 41 235 IPR003593 -
Mtr4g3179 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 247 IPR027417 -
Mtr4g3179 632 Gene3D - 12 272 IPR027417 -
Mtr4g3179 632 Pfam ABC-2 type transporter 334 547 IPR013525 GO:0016020|GO:0140359
Mtr4g3179 632 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 7 632 - -
Mtr4g3179 632 Pfam ABC-2 type transporter 215 279 IPR043926 GO:0140359
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr4g3179 Mtr-Chr4 45218494 45222667 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3179 31 244 Calmodulin-binding Proteins AT2G36910 30.317 3.49e-12 67.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3179 K05681 - gmx:100790102 933.71
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3179 4 45218494 45222667 Mtr4g3179 4 45218494 45222667 ECH