Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3178 ATGAAGCACACAGGAAATATTCTAATCAATGGCCACAAACAAGCACTGGCTTATGGAATATCAGGCTATGTAACACAAGACGAGGCTATGCTATCAAGATTAACGGCCAGAGAAACTTTATACTACTCAGCTCAGCTTCAATTTCCAGATTCCATGTCCATAACAGAGAAGAAGGAACAAGCTGATCTTATACTCCGAGAAATGGGACTAATAGAAGCTGTTAACACAAGGGTTGGAGGATGGGGTTCTAAAGGTCTAAGTGGAGGACAAAGGAGAAGACTTAGCATTTGCATCGAGATTCTAACGCGCCCGAGACTTCTCTTCCTTGATGAACCGACTAGCGGACTTGATAGTGCAGCTTCCTACTATGTTATGAGTGGAATTGCACGTTTGAATTTAAGGGACGGAATTCAAAGGACTATTGTTGTATCCATCCATCAACCTAGCAGTGAACTTTTTGAACTTTTTCATGACCTTTGTCTTCTGTCTTCTGGTGAAGCTGTCTATTTTGGTCCAGCCTATGATGCAAATCAGTTTTTTGCTGCAAATGGTTTTCCTTGTCCAACTCTCCACAATCCTTCTGATCACTATTTAAGGATCATAAACAAAGATTTTGAAATGGATGTTGAAGAAGGATTTGGTAAGGGAGTAACCACAGAAGAAGCAATTGGTATCCTTGTAAAGTCTTATAGATCATCTCAAATTAGAACCCAAGTTAAAAAAAAAGTGGAAATTATAAGTAAAAGTGACTCTGGTGCAATAGGGAAGAAGAGGATTCATGGTGCATTTACCACTCAATGTCTTGTTCTAATAAGAAGATCTTCTTTGCAATTGTTTCGAGACGTAGGCAATTATTGGCTACGTTTAGTCGTCTTTGTTATGATTGCCATAAGCATTGGTTCTATCTTCTATGGCATTGGCTCAAGTAGTGGTTCGGCATCTATTCAGGGGAGAGGTTCTCTGCTCACATTTCTTGTTTCAGTTCTGACTTTCATGACCCTTGTTGGTGGATTCTCTCCTCTTTTGGAGGAAATGAAGGTATTTGAACGAGAGAGATTGAATGGACACTATGGCGTTACTGCTTTTCTGATTGGAAATATATTCTCTTCACTACCTTACATAATAATGATCTCAGTGATACCTGGAGGAATAGCATACCAACTTTGTAAAATGCACAAAGGACTAGAGCATTTTCTATACTTCATTTCATTGCTAATAGCCATTGTAATGTGGGTTGAAAGCCTAATGTTGGTAGTTGGAAGCATCTCTCCAAATTATGTAATAGGAATGTTCATTACTGGTGGAATTGAAGGACTCATGATTTTAACAGCAGGATTCTATAGATTACCAAATGAACTTCCTAAATTACTATGGAAATACCCTTTATACCATATATCTTTCCTTAAGTATGCATTTCAAGGATCATTCAAGAATGAATTTGAAGGGTTAAAAGTTGATGTGGGGACCAACATTGTGAGTGGTAGAGAAATATTGAATGATAAATGGCATGTTGAAATTGGTCACTCTAAGTGGGTTGATCTTGCTATCATGTTTGGCATGATTGTGTTGTATAGAGTTCTATTCTTGGTCATCACCAAGAGCAAGGAGAAGTTGAAGCCAAGTGGTCCTTAA 1632 0.3836 MKHTGNILINGHKQALAYGISGYVTQDEAMLSRLTARETLYYSAQLQFPDSMSITEKKEQADLILREMGLIEAVNTRVGGWGSKGLSGGQRRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSGIARLNLRDGIQRTIVVSIHQPSSELFELFHDLCLLSSGEAVYFGPAYDANQFFAANGFPCPTLHNPSDHYLRIINKDFEMDVEEGFGKGVTTEEAIGILVKSYRSSQIRTQVKKKVEIISKSDSGAIGKKRIHGAFTTQCLVLIRRSSLQLFRDVGNYWLRLVVFVMIAISIGSIFYGIGSSSGSASIQGRGSLLTFLVSVLTFMTLVGGFSPLLEEMKVFERERLNGHYGVTAFLIGNIFSSLPYIIMISVIPGGIAYQLCKMHKGLEHFLYFISLLIAIVMWVESLMLVVGSISPNYVIGMFITGGIEGLMILTAGFYRLPNELPKLLWKYPLYHISFLKYAFQGSFKNEFEGLKVDVGTNIVSGREILNDKWHVEIGHSKWVDLAIMFGMIVLYRVLFLVITKSKEKLKPSGP* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3178 543 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 180 IPR027417 -
Mtr4g3178 543 Pfam ABC-2 type transporter 146 207 IPR043926 GO:0140359
Mtr4g3178 543 Pfam ABC-2 type transporter 265 480 IPR013525 GO:0016020|GO:0140359
Mtr4g3178 543 Gene3D - 2 181 IPR027417 -
Mtr4g3178 543 Pfam ABC transporter 19 114 IPR003439 GO:0005524
Mtr4g3178 543 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 1 541 - -
Mtr4g3178 543 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3178 Mtr-Chr4 45212071 45215795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3178 50 150 Calmodulin-binding Proteins AT2G36910 33.663 2.48e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3178 K05681 - gmx:100790102 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3178 4 45212071 45215795 Mtr4g3178 4 45212071 45215795 ECH