Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3160 ATGGAGGGTGGAAACAGAGCTGAAGCTGAACGGTGGCTTTACACCGCCAACAAACTCCTAAGCGCACGTGATCTGCACGGTGCACGCTCCTTCGCGATCCGTGCCCGAGAATCCGACCCAACCTTCGACGCCTCTGAGCTTCTCTTAGCTGTCATCGACACTCTCCTCGCCGGAGAATCACGGATCAATGATCACCACCGTGATTGGTACGGAATTCTTCAAATTCTCCGATACACCACCAACATCGACCACATCGCGAATCAGTATCGCCGACTTGCTCTCCTCCTTGACCCTAATCGTAACCCATTCGCTTTCTCCGGTCATGCTTTCTCCCTTGTTCATGATGCTTGGTCTGTTCTTTCAAATCCTGCTAAGAAAGCTATGTACGATAGTGATCTAAGGTTGCTCACTACACCACCGGTTCCGTCACAGCCTCAGCCACAACTGGCTCCTCAGTATCAACAACCTCCACAACAGCCACTGCAGCAGCCTCCACAGCCAACGCCGAGGAAAAACTCTAGATCGAGGGATAGCACTGGCGCCACCGCCACCGAGCCGACACTGTCTCGACAGAATCGGAACCCTAGCGAGGCAGGTGAGACGACTCGGCAGACGCGAATAGCGAGTGCTGCTGAAACGGTAGGTAACATAAGTTTTTGGACATTGTGCCCTTACTGTTACGTTCACTATGAGTATCCGAAGGAGTATGAAGATTGTACCTTACGGTGTCAGAGTTGTCGGAGGGGGTTTCATGCGGTTGTGATACGTTCACCGCCGGTGAATGAGATAGATTCTTCGTTTTGTACTTGGGGATTTTTTCCATTAGGGTTTTCTGGTGATTCTAAAGATTTGAATGGGGCTTCTTCCAATTGGAACCCTATTGCACCGTTGTTTCCGTGTACGATGAAAGGATCGTCTAATAGGAAAAAGAATTGGGTTTATTATGATGAAGAGGCAACTGCGGCGTTTATTGATATTTCTGATCCCAGTGATAATGATTCTGATGATGGGGATTGGAGAGGTGGTGCTGGTAAGAGGAGAGGGGTGAAGAGCTCAGGGGTTAGTACTAGTAAAAAGATTAGGAAAGATTCCGGTAATGCTAGTGGTAGGGGAGCTGTTGGGAGACCTAGGAGGAGTGCTACTGGTGCTGCATCTGGGAATGAGAAGAATGTTGGGGCTGTTGATGATGCTTCTGCCGCTGCCTCTGGTGTAAGGGCAGATGCCAATACCATTAAGAAAGCTGCACTGGGTAGTTCCAGGAGGAGGGGTGCTGGAAACTTGGATTTGAATGTGGAGTTCAGTAATGATGTGGAGGAGCCGTCCCGTGGAGTGCGTGCCCGTGAAGGGAATGCAACTGGCAATGCTGAGGATAATATTGATGGGGTTGGGTTTTTTGAGGGTCTTGATGAGTTCCTTAGTAGCTTACCCATTCTCAATCCGGTGGGAGATGATAAGGTTAAGGGTCATTAG 1470 0.4966 MEGGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDPTFDASELLLAVIDTLLAGESRINDHHRDWYGILQILRYTTNIDHIANQYRRLALLLDPNRNPFAFSGHAFSLVHDAWSVLSNPAKKAMYDSDLRLLTTPPVPSQPQPQLAPQYQQPPQQPLQQPPQPTPRKNSRSRDSTGATATEPTLSRQNRNPSEAGETTRQTRIASAAETVGNISFWTLCPYCYVHYEYPKEYEDCTLRCQSCRRGFHAVVIRSPPVNEIDSSFCTWGFFPLGFSGDSKDLNGASSNWNPIAPLFPCTMKGSSNRKKNWVYYDEEATAAFIDISDPSDNDSDDGDWRGGAGKRRGVKSSGVSTSKKIRKDSGNASGRGAVGRPRRSATGAASGNEKNVGAVDDASAAASGVRADANTIKKAALGSSRRRGAGNLDLNVEFSNDVEEPSRGVRAREGNATGNAEDNIDGVGFFEGLDEFLSSLPILNPVGDDKVKGH* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3160 489 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 489 - -
Mtr4g3160 489 SUPERFAMILY Chaperone J-domain 64 133 IPR036869 -
Mtr4g3160 489 MobiDBLite consensus disorder prediction 135 205 - -
Mtr4g3160 489 SMART dnaj_3 67 125 IPR001623 -
Mtr4g3160 489 CDD DnaJ 68 122 IPR001623 -
Mtr4g3160 489 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Mtr4g3160 489 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 489 - -
Mtr4g3160 489 MobiDBLite consensus disorder prediction 140 167 - -
Mtr4g3160 489 Gene3D DnaJ domain 57 138 IPR036869 -
Mtr4g3160 489 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Mtr4g3160 489 MobiDBLite consensus disorder prediction 168 205 - -
Mtr4g3160 489 MobiDBLite consensus disorder prediction 326 390 - -
Mtr4g3160 489 Pfam DnaJ domain 68 130 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3160 Mtr-Chr4 45104630 45106626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3160 8 488 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.315 2.27e-98 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3160 - - cam:101509006 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3160 4 45104630 45106626 Mtr2g0191 2 1957765 1959930 PCT