Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3132 ATGTTGTTTGCATCACCAAAAGCAATGCATGTTCAGTTTCCCAATTATTTATTTTTAACAATTTTCTTAATCTTGAACTTGAACTTGTTTATTCCAAATGCATCTTCATTGACCTTTAATTTCACTAGCTTTGACCCGAATGACAAAAGCATAATCTATGAAGGATCAGCAAATCCTGCTTCATCAGCTATCCAACTTACAATCAACTATGGAAGCATTGGTAGAGCCACATATTACCAACCTATCCATCTTTGGAACAAAATCACAAACAATCTCACAGATTTCACATCTCATTTCACATTTACAATAGATTCACAGAATAGACAAATGTATGGAGATGGGATTGCATTCTTCCTAGCCCCTTATGGTTCAAAAAAGCCTAATGCAACAAAAGGTGGTTCTATGGGTCTAACACTTGATAATCAAAGGTTGAACTCAACTGATAATCCATTTGTTGCTGTGGAGTTTGATATCTATCGGAATCATTGGGATCCACCTCTTGAACATGCCGGAATCGACATCAACTCTATGCTGTCTGTTGCTAATGTTACATGGTTGGCTGATATCAAACAAGGTAGACTCAATGAGGCTTGGATCAATTACAATGCTAGTTCATTAAATCTAAGTGTTTTATTCACTGGTTTTAATAACGTAACTTCTAGCATTGTGAATCAACATTTATCTTCCATAGTTGATCTTAGACTTTATCTGCCAGAATTTGTTACTATTGGCTTCTCAGCTGCCACTGGAAATCGCACTGCTGTACACAGTATCTCTTCATGGGATTTTAGCTCAACTTTAGAAGGACAACAAGATAACAACAAAACAAACACACAAGACCCAGTTACAAAGTCTCCATCTTCAAACAAAAAGGCCAAGACAGGACTAGCAGTGGGATTGGGAACCGGTGGATTTGTTCTCATTGGTGTATTTGGTTTTATTTGGGTTTTCTTGTGGAGGAAAAGAAGAGAACAGGAAGATGGTGAATTTCAAGAGTACATGGGTGAAGATTTCGGAAGAGGGACAGGACCCAAGAAGTATACATATGCAGAATTAGCAAATGCAGCTAATAATTTCAAAGATGAGCATAAGCTAGGACAAGGAGGATTTGGAGGTGTTTATAGAGGCTTTCTAAAAGACACAAAATCTTATGTTGCTATTAAGAGTGTGTCAGAAGATTCTCATCAAGGGATAAAGGAATTTGCATCAGAAGTAACGATAATTAGCAAATTAAGGCATAGAAATCTAGTGCAATTGATTGGTTGGTGTCATCAAAGGAAAAAACTCTTGCTTGTGTATGAGTACATGCCAAATGGTAGTTTAGACATTCATCTTTTCAAGAAACAAAGTTTGTTGAAATGGGGTGTTAGATATACAATAGCTAAAGGCTTGGCATCTGCATTGTTGTACTTGCATGAAGAATGGGAACAATGTGTTGTACATAGAGACATAAAAGCAAGTAACATCATGTTGGATTCAGAATTTAACGCAAAACTTGGAGATTTCGGTTTAGCAAGGTTTGTGGATCATGCAAAAGGTGGACAAACCACAGCTTTAGCAGGGACTATGGGATACATGGCTCCTGAATGTGCTACCACAGGAAGGGCCAGTAAAGAAACCGATGTGTATAGTTTTGGAATTGTTGCTTTAGAGATAGCTTGTGGAAGAAAACCAATAATTAATGCTCAAGAAAATGAAATAAACATTGTGGAATGGGTTTGGGGGCTATATGGAAGAGGGAGAATTGTTGAAGCAGTAGATCCAAGACTAGATGGAGATTATGAAGAGGAACAAATCAAGTGCATGATGATTGTTGGTCTTTGGTGTGCTCATCCTGATCCTAATAATAGGCCTTCAATAAGACAAGCTATTCAAGTGCTTAATTTTGAAGTTCCATTGCCTAATCTTCCATCAAGTATGCCTGTACCAACATATCTTGATGGCCCTTTGAATTCATTCACTGCTCCATTCAACACAAATGGTTCAGAGGAAGGTCCAAACATGAATATAGAAAGCTTTAGTTCAAATACAAACTCATCTGGTTTGACTACTACAACTACTTCTAATGATGTTTCTCCTTCTATGTGA 2088 0.3731 MLFASPKAMHVQFPNYLFLTIFLILNLNLFIPNASSLTFNFTSFDPNDKSIIYEGSANPASSAIQLTINYGSIGRATYYQPIHLWNKITNNLTDFTSHFTFTIDSQNRQMYGDGIAFFLAPYGSKKPNATKGGSMGLTLDNQRLNSTDNPFVAVEFDIYRNHWDPPLEHAGIDINSMLSVANVTWLADIKQGRLNEAWINYNASSLNLSVLFTGFNNVTSSIVNQHLSSIVDLRLYLPEFVTIGFSAATGNRTAVHSISSWDFSSTLEGQQDNNKTNTQDPVTKSPSSNKKAKTGLAVGLGTGGFVLIGVFGFIWVFLWRKRREQEDGEFQEYMGEDFGRGTGPKKYTYAELANAANNFKDEHKLGQGGFGGVYRGFLKDTKSYVAIKSVSEDSHQGIKEFASEVTIISKLRHRNLVQLIGWCHQRKKLLLVYEYMPNGSLDIHLFKKQSLLKWGVRYTIAKGLASALLYLHEEWEQCVVHRDIKASNIMLDSEFNAKLGDFGLARFVDHAKGGQTTALAGTMGYMAPECATTGRASKETDVYSFGIVALEIACGRKPIINAQENEINIVEWVWGLYGRGRIVEAVDPRLDGDYEEEQIKCMMIVGLWCAHPDPNNRPSIRQAIQVLNFEVPLPNLPSSMPVPTYLDGPLNSFTAPFNTNGSEEGPNMNIESFSSNTNSSGLTTTTTSNDVSPSM* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3132 695 PANTHER - 21 694 - -
Mtr4g3132 695 Pfam Protein kinase domain 359 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3132 695 Pfam Legume lectin domain 36 277 IPR001220 GO:0030246
Mtr4g3132 695 Gene3D Phosphorylase Kinase; domain 1 344 435 - -
Mtr4g3132 695 SMART serkin_6 359 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3132 695 MobiDBLite consensus disorder prediction 656 695 - -
Mtr4g3132 695 CDD lectin_legume_LecRK_Arcelin_ConA 37 267 IPR001220 GO:0030246
Mtr4g3132 695 ProSitePatterns Protein kinases ATP-binding region signature. 365 388 IPR017441 GO:0005524
Mtr4g3132 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Mtr4g3132 695 ProSiteProfiles Protein kinase domain profile. 359 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3132 695 ProSitePatterns Legume lectins alpha-chain signature. 237 246 IPR000985 -
Mtr4g3132 695 Coils Coil 695 695 - -
Mtr4g3132 695 MobiDBLite consensus disorder prediction 266 291 - -
Mtr4g3132 695 Gene3D Transferase(Phosphotransferase) domain 1 436 648 - -
Mtr4g3132 695 SUPERFAMILY Protein kinase-like (PK-like) 343 643 IPR011009 -
Mtr4g3132 695 CDD STKc_IRAK 365 628 - -
Mtr4g3132 695 PANTHER RECEPTOR LECTIN KINASE 21 694 - -
Mtr4g3132 695 Gene3D - 34 281 - -
Mtr4g3132 695 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 277 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3132 Mtr-Chr4 44862270 44864538 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3132 23 645 Receptor kinase-like Gene Family AT5G10530 49.533 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr4g3132 Pkinase 4.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3132 - - mtr:MTR_4g093080 1320.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3132 4 44862270 44864538 Mtr4g3132 4 44862270 44864538 ECH