Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3130 ATGGCTCCTCCTATATTCTGCTATGCAAGGGGAACAATTATGCTTTTCCTGATAATCCCTCTTGCACATGCCCACCTTGTGTCTTTTGATTACCCTATGTTTAATCACAACTGTAAAGAGCTACCAGAGCTTGATGGTGATGCCACTATTGAAGATTCTGACAATATTATTCAACTCACTGGGTATACTGATGACCCAGATAAGGCTTCTAGTGTTGGTCGAGTCACAAGTCCCAAACTTATCAAACTTTATAACAGAAGCACAAATGAAGTGTATGACTTTAGGACGAAGTTTTCTTTTACTATATTTTCAAATCACAGTTCTTATGGAGATGGTTTGGCATTCTTCCTAGCAAGCTCAAATCTCACAAAAGCAAATCGTATAGGAGGTGGAGGGGGTTTTGGTCTTGTGCCTGCAAACGAAGTTGCTTTAAACTCAACTGAGTATTCAATTGTGTTAGTGGAGTTTGACACGCACAAAAATATTTGGGACCCAGGGTTCCCCCACGTGGGAGTGAATATCAATTCTGTGGTGTCCGACACAAATATCGAATGGTTCTCAAATGTTTCGGAAAGGATGGTTTATAATTGTAGCATCGAATACATATCCAGAAATAATGTTCTGAATGTTTCTTTCACTGGATACAGATTGAACGCATGGCAAGAGCCACAGAACTTTTCACACATCATTAATCTAAGAGAGCATTTACCAGAGTATGTTAGGGTTGGCATATCAGCTTCAACAGGAAAAGTGGACGAGGAACATATGCTGCTCTCATGGTCTTTTAGTACAAGCCAACCAAGTTATTTTGTAGTTGATCCTCGGAAGACTAAATTGTGGGAGGGATTGGCAGTTGGTGGTGTATGTTTGTCTTGGAGTTTAGTAGCAATTTTAATCATTTTCTTGTGGAAGAAGAACAAAGGAAAAGAAGATGAACCTACTTCAGAAACCACTTCTGATCAGGATATGGATGATGAATTCCAAATGGGTGCTGGACCAAAGAAGATTAGTTATTATGAATTGTTGAATGCAACAAACAACTTTGAAGAGACACAGAAGCTAGGCCAAGGTGGTTTTGGCGGTGTTTATAAGGGCTATTTTAAAGACTCGAACTCAGTTGCAGCTATCAAGAGGATTTCAGCAGATTCAAGGCAGGGTGTAAAACAATACTCCGCAGAAGTGAAGATCATTAGCCAGTTGAGGCATAGAAATTTAGTGAAACTCACTGGTTGGTGCCACAAGAAGAATGAACTTATCCTGATATACGAATACATGCCTAATGGCAGCTTAGACTTTCATCTTTTTCGCGGAGGAAGCATCTTGCCTTGGAACTTAAGGTACAATATAGCTCTTGGGTTGGCCTCGGCATTGCTTTATTTGCAGGAAGAATGGGAAAAATGTGTGATTCATAGGGACATAAAATCAAGCAACATAATGTTGGACTCCGACTTCAATACTAAGCTAGGGGATTTTGGTCTAGCTAGGTTGATGGATCATGAGAAAGGGTCAGAAACCACAGTTGTAGCTGGAACCCGAGGTTACCTAGCACCTGAATACATTGACACAAGCAAGGCTAGAAAAGAATCAGATATATTTAGTTTTGGGGTTGTTTTGTTGGAGATAGCCTGTGGAAAAAAAGCCATACACCACCAAGAATTAGAGGGTGAAGTATCATTAGTTGAATGGGTTTGGGAGCTGTATGGATTGAGAAATCTAATTGTAGCAGCAGATCCAAAGCTATGTGGGATATTTGATGTGAAGCAATTGGAATGTTTGCTAGTTGTTGGACTTTGGTGTGCTAATCCAGATATCACTTCAAGACCATCGATAAAGAAAGTGATTAAGGTGCTCAACTTTGAAGCTCCATTACCAATTCTTCCACTAAACATGCCATTCTTAGCCTCTCTATCTCCTACAACTAATGAGCAATTTTTCTCCGTTCCTTCTTTCTTTAGGTCTACAGGTTAG 1968 0.3999 MAPPIFCYARGTIMLFLIIPLAHAHLVSFDYPMFNHNCKELPELDGDATIEDSDNIIQLTGYTDDPDKASSVGRVTSPKLIKLYNRSTNEVYDFRTKFSFTIFSNHSSYGDGLAFFLASSNLTKANRIGGGGGFGLVPANEVALNSTEYSIVLVEFDTHKNIWDPGFPHVGVNINSVVSDTNIEWFSNVSERMVYNCSIEYISRNNVLNVSFTGYRLNAWQEPQNFSHIINLREHLPEYVRVGISASTGKVDEEHMLLSWSFSTSQPSYFVVDPRKTKLWEGLAVGGVCLSWSLVAILIIFLWKKNKGKEDEPTSETTSDQDMDDEFQMGAGPKKISYYELLNATNNFEETQKLGQGGFGGVYKGYFKDSNSVAAIKRISADSRQGVKQYSAEVKIISQLRHRNLVKLTGWCHKKNELILIYEYMPNGSLDFHLFRGGSILPWNLRYNIALGLASALLYLQEEWEKCVIHRDIKSSNIMLDSDFNTKLGDFGLARLMDHEKGSETTVVAGTRGYLAPEYIDTSKARKESDIFSFGVVLLEIACGKKAIHHQELEGEVSLVEWVWELYGLRNLIVAADPKLCGIFDVKQLECLLVVGLWCANPDITSRPSIKKVIKVLNFEAPLPILPLNMPFLASLSPTTNEQFFSVPSFFRSTG* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3130 655 CDD lectin_legume_LecRK_Arcelin_ConA 27 265 IPR001220 GO:0030246
Mtr4g3130 655 PANTHER LECTIN RECEPTOR KINASE 12 654 - -
Mtr4g3130 655 Pfam Legume lectin domain 27 267 IPR001220 GO:0030246
Mtr4g3130 655 ProSiteProfiles Protein kinase domain profile. 348 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3130 655 PANTHER - 12 654 - -
Mtr4g3130 655 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524
Mtr4g3130 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Mtr4g3130 655 Gene3D Transferase(Phosphotransferase) domain 1 425 630 - -
Mtr4g3130 655 Gene3D Phosphorylase Kinase; domain 1 333 424 - -
Mtr4g3130 655 SUPERFAMILY Protein kinase-like (PK-like) 333 644 IPR011009 -
Mtr4g3130 655 CDD STKc_IRAK 354 618 - -
Mtr4g3130 655 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 266 IPR013320 -
Mtr4g3130 655 SMART serkin_6 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3130 655 Gene3D - 25 268 - -
Mtr4g3130 655 Pfam Protein kinase domain 348 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3130 Mtr-Chr4 44854288 44856546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3130 12 631 Receptor kinase-like Gene Family AT5G10530 45.212 2.33e-172 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr4g3130 Pkinase 5.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3130 - - cam:101492002 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3130 4 44854288 44856546 Mtr4g3130 4 44854288 44856546 ECH