Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3129 ATGGCTCCTTTGTATGTTAGTCTTCACACTCAAACTCTTGTTTTATGTTATACAATAGGAATCATTTCCACCCTCCAAATAATCCATATTGCAAACTCACTATCATTTGAATACCCCTACTTTAAGAATGGTGATGTCAATTGGGAAGGAGATGCTTCTCCTTATAAAGGAGCTATTCAAATCACTTCTAATACCCTTGACCAAAACAACAATTACAGTGTCGGGCGAGTCACAAGTTTCAAACAAATGCGTCTCTGGGATTTGAACTCTGGAAACCTCTCTGACTTCACCACCAAGTTTTCCTTTGTCGTATATTCAAACAAAAGAGATTATGGAGATGGAATGGTATTCTTCTTGGCTGATCCAGCTCTCCCACTTTTGAAGAATATTTCAGAAGGAGGTGGTCTTGGCCTTGTGGATGGAAATCAAGTGCTAAAATCAACTCAGCACTCTTTTGTGGCAGTGGAGTTTGACACCTTCAATAATCCATGGGACCCTCCAGGTGAAGGCACTCATGTTGGCTTGAATTTCAACTCTATGAGGTCTAACATAACTAAGCCATGGTTGACAAATATTCAAGAACGGAGAGTTTACAATTGTAGCATTGAGTACAAATCAAGCACTCTAAATTTGAGTGTTTCATTCACCATGTATGATGATGATGATGATAAACCATTTGAAGAGTACATATCACACAAGGTTGATTTGAGAGATGTCTTACCAGAGAGGGTTATTGTTGGCTTCTCTGCTGCAACAGGAATATTGTATGAGGTGCATACTCTCCGATCATGGTCATTTAGTTCAAGTCTACTAAGTGATGAGACCAAAAATCAGGTAGTGGCACCGATCCCCAGTCCTATAATTTCTGAAAAAGAAAACAAGATGGGATTGAAGGTGGGGCTTGGAATTGGTACAGGCTTGGCTGTGAGTTTATCAGGGTTGGTTTGTACTCTATTATGGAAGATGAGTAGAGGGAGAAAAGAAGAGTTTGGTTTTGATCTCAACATGGATGATGAATTCCAAAAGGGATCTGGACCTAAGAGATTTTCCTACAATGAACTAGTGAGTGCAACAAATAAATTTTCAGAGTCAGGTAAGGTAGGGCAAGGTGGTTTTGGTGGTGTATACAAAGGTTATTTGAAAGACTTAAATTCCTATGTTGCTGTCAAGAGGATATCAAGAGAGTCTAGACAGGGAATACTAGAATACGCCACTGAAGTGAAGGTCATAAGCCAATTGAGACACAGGAATTTAGTACAACTTCTTGGTTGGTGCCATAGGAAGAATGATTTTCTTCTTATATATGAGTTCATGTCAAATGGAAGCTTAGATTCTCATCTATACAGTAAAAAGAGCTTATTGACATGGACAATGAGGTATAATATAGCATTGGGCTTGGCTTCAGCATTGCTTTACCTACAGGAAGAATGGGAACAGTGTGTGCTTCACAGGGACATTAAATCCAGTAACATTATGTTGGATTCATGTTTCAATGCTCGGCTTGGTGATTTTGGTTTAGCTAGGCTTGTAGATCATGAGACGGGGTCACAAACCACAATTATAGCTGGGACAAGGGGTTATATTGCACCTGAATATTTCACATCAGGAAAGCCTACCAAGGAATCTGATATATTCAGCTTTGGAGTAGTGTTATTGGAAATAGCCAGTGGAAGGAAAGCTATTGAAAGAGAAGAAAAAGAGGGTCAAATAAGTGTAGTGGAGTGGGTTTGGGAGCTCTATGGATTGGGGAAGTTCCTTGAAGCAGTTGATCCCAAGTTATGTGGAGCATTTGATGAGCAACAACTGGAACGTTTGGTGATTGTTGGCCTTTGGTGTGTTCATCCAGATTATTCATTCAGGCCTTCTATAAGACAAGTGATTCAGGTTCTCAAATTTGAGTCTCCTTCACCAATACTTCCAGAAAAAATGCCTGTGCCAACCTATCTTCCTCCAACAATAAAAGCACTTTTTTCTTCAGTTTCGTCTATATATTGGACAAATAGTTAG 2007 0.3951 MAPLYVSLHTQTLVLCYTIGIISTLQIIHIANSLSFEYPYFKNGDVNWEGDASPYKGAIQITSNTLDQNNNYSVGRVTSFKQMRLWDLNSGNLSDFTTKFSFVVYSNKRDYGDGMVFFLADPALPLLKNISEGGGLGLVDGNQVLKSTQHSFVAVEFDTFNNPWDPPGEGTHVGLNFNSMRSNITKPWLTNIQERRVYNCSIEYKSSTLNLSVSFTMYDDDDDKPFEEYISHKVDLRDVLPERVIVGFSAATGILYEVHTLRSWSFSSSLLSDETKNQVVAPIPSPIISEKENKMGLKVGLGIGTGLAVSLSGLVCTLLWKMSRGRKEEFGFDLNMDDEFQKGSGPKRFSYNELVSATNKFSESGKVGQGGFGGVYKGYLKDLNSYVAVKRISRESRQGILEYATEVKVISQLRHRNLVQLLGWCHRKNDFLLIYEFMSNGSLDSHLYSKKSLLTWTMRYNIALGLASALLYLQEEWEQCVLHRDIKSSNIMLDSCFNARLGDFGLARLVDHETGSQTTIIAGTRGYIAPEYFTSGKPTKESDIFSFGVVLLEIASGRKAIEREEKEGQISVVEWVWELYGLGKFLEAVDPKLCGAFDEQQLERLVIVGLWCVHPDYSFRPSIRQVIQVLKFESPSPILPEKMPVPTYLPPTIKALFSSVSSIYWTNS* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3129 668 ProSiteProfiles Protein kinase domain profile. 361 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3129 668 CDD lectin_legume_LecRK_Arcelin_ConA 34 264 IPR001220 GO:0030246
Mtr4g3129 668 Gene3D - 31 286 - -
Mtr4g3129 668 PANTHER - 18 667 - -
Mtr4g3129 668 CDD STKc_IRAK 375 631 - -
Mtr4g3129 668 ProSitePatterns Legume lectins beta-chain signature. 153 159 IPR019825 -
Mtr4g3129 668 Gene3D Transferase(Phosphotransferase) domain 1 438 650 - -
Mtr4g3129 668 ProSitePatterns Legume lectins alpha-chain signature. 240 249 IPR000985 -
Mtr4g3129 668 Gene3D Phosphorylase Kinase; domain 1 346 437 - -
Mtr4g3129 668 SMART serkin_6 361 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3129 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 285 IPR013320 -
Mtr4g3129 668 Pfam Protein kinase domain 362 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3129 668 SUPERFAMILY Protein kinase-like (PK-like) 345 653 IPR011009 -
Mtr4g3129 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Mtr4g3129 668 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE 18 667 - -
Mtr4g3129 668 Pfam Legume lectin domain 33 276 IPR001220 GO:0030246
Mtr4g3129 668 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3129 Mtr-Chr4 44850596 44853179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3129 15 648 Receptor kinase-like Gene Family AT5G10530 45.988 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr4g3129 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3129 - - gmx:100780181 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3129 4 44850596 44853179 Mtr4g3129 4 44850596 44853179 ECH