Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3122 ATGGAGACCTATCAATATCCACCGTCATATCCAGATTCCGGTAACTCATCACCGCTTTCACGAGAAATCGATTTCGAAAATCCTTCTTCATGGGAGGACCAACAAAACTACAAAGCAAAATTCATGTGCAGTTACGGCGGAAAAATCCAACCACGCAGCCACGACAACCAGCTTTCCTACATCGGCGGCGACACCAAAATACTCGCCGTCGACCGCAGCATCAAGTTTCAAGCCTTTCTCTCGAAGCTTTCAACTCTCTGCGACGCACTTCAACAAGATATAAGCTTCAAGTATCAGCTTCCGGGAGAAGAACTTGATGCTCTTATCTCTGTTACTACTGAAGATGATCTTGAACATATGATGCATGAGTATGATCGTCTCTATCGTCCTTCTTCAAAACCTGTGAGAATGAGGCTTTTTATATTCATCGCTCCGAATTCGGGTTCGGTTTCGGCTTCTCAACCTGATCCACTTAAACCTAATTCCAAAGTTGATTTTCTCTTTGGTATTGAGAATAAAACCCTAGCTCAACCGATTCAACCTTCGTATGCTGCTGTGACTGCCAAGTATCACGATCCTGTGCCGGATCTTGTTGCTCCACAACCGGACTATCCACCACGTGGATCTACCGATGAGAGTGTAGAGATTCAGAGACAGTTACAGCGTTTGCAGGTTTCTGAGAGTGAGCAGTCTCTATATCGGAGAAGTTCGGATGGTGTTACAGGTGGTTACGCCGCCGCTCCCGGCGGTGATTATTACGTACAGAAGATGCCGGAGAATATTCCTCGGTCTAATTCGCCAGTAACAGTTCATCATCCTGCAGGTTACTGGCCGGATAAACAATTTTCCGGCGAAGCTTTTCCTGTGACAGGGATGAACACTTCCGGTGGAGGGGATCAGCATGTTTACATGATGCCGCCGCCGGGAACATTCTATCAGACAGCACAGATGATGCGTCCACCGACAGCGCAGGGGTACTACGCAGTGCAAAGAATGGCTTCTGATGGATACCGGGAACAACCGGTGTACGGCGGCATTCCGCCTCAGAATGTTGCATTTTCGTCGTCGTCGGCGGCTCAGCCAGTCAATCCTTCGGCTTATCAGGAAGGATACGGCTTAGTTAGGCCAGCTGTTGTAGCGGAAAATGCGGGAGCTGCTGGATATGCGCAAGTGGCGTATGATAGTTCAAGTGGGAGACATGTTTACTATACTACGCCGGGAGGCATGGTCCACGCACCACAGTATCAACATGGGGTTTCTCCGGTATTCAGCAATGATATGAGACCGGCTGCGGTTCCTGGGGGCCAGGATCCTAAAGTGGTAAACAAAGGTTCACATTCACAAGGATTGTGA 1353 0.4863 METYQYPPSYPDSGNSSPLSREIDFENPSSWEDQQNYKAKFMCSYGGKIQPRSHDNQLSYIGGDTKILAVDRSIKFQAFLSKLSTLCDALQQDISFKYQLPGEELDALISVTTEDDLEHMMHEYDRLYRPSSKPVRMRLFIFIAPNSGSVSASQPDPLKPNSKVDFLFGIENKTLAQPIQPSYAAVTAKYHDPVPDLVAPQPDYPPRGSTDESVEIQRQLQRLQVSESEQSLYRRSSDGVTGGYAAAPGGDYYVQKMPENIPRSNSPVTVHHPAGYWPDKQFSGEAFPVTGMNTSGGGDQHVYMMPPPGTFYQTAQMMRPPTAQGYYAVQRMASDGYREQPVYGGIPPQNVAFSSSSAAQPVNPSAYQEGYGLVRPAVVAENAGAAGYAQVAYDSSSGRHVYYTTPGGMVHAPQYQHGVSPVFSNDMRPAAVPGGQDPKVVNKGSHSQGL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3122 450 SMART PB1_new 53 144 IPR000270 GO:0005515
Mtr4g3122 450 CDD PB1_UP2 42 142 - -
Mtr4g3122 450 Pfam PB1 domain 54 141 IPR000270 GO:0005515
Mtr4g3122 450 Gene3D - 59 143 - -
Mtr4g3122 450 MobiDBLite consensus disorder prediction 426 450 - -
Mtr4g3122 450 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 1 443 - -
Mtr4g3122 450 SUPERFAMILY CAD & PB1 domains 54 150 - -
Mtr4g3122 450 MobiDBLite consensus disorder prediction 1 28 - -
Mtr4g3122 450 PANTHER OS05G0427100 PROTEIN-RELATED 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3122 Mtr-Chr4 44764779 44766595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3122 29 147 MAP Kinase Kinase Kinase AT3G46920 40.000 3.72e-23 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3122 4 44764779 44766595 Mtr2g0214 2 2255384 2257169 PCT