Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3117 ATGTTGGAATCTTTACTAGCTTCTTCCCAAACCATCAAGGGATATGACCTGACCAAACAAAAGAGTCCCGGTTATTCTCGTGCTGTTTCGCGGATTCGTACAAGTTCTATGTTCACGCATTATTCAGTTGACAAGCAAGTTCCGTTTCAATGTCAAAGTACTGCTGCATCAGAAAAATTCACTAGAAGAAGGCCTCTGGATGCTCCTTCATTTTCTGGTCGGAATTTATCCTATTTCTCCAAGCATAGGCAACTACGGTGGGATCGGTTACAGACAAATGTTACGTATGATGTTGCTAGTGCGGTTGAAGTCATCAATGATTTAGGATTGGATACTCTTACTTTCTTGGCCGTCACTGTCTTTATTGTCCCCTCATTCAAATTAATTAAAGCCAGTCCTATACTTGGTTTCTTCTGTGCTGGAGTGGTGCTAAATCAGTTTGGTTTAATTAGGAACCTTGAAGATGTTAAAGTTTTGTCTGAATGGGGAATCCTTTTCCTGCTGTTTGAGATGGGTTTAGAACTTTCCCTAGCACGTCTGAAGGCTCTTGCAAAATATGCCTTTGGAATGGGACTGACTCAGGTTCTACTATCTACTTTAGCATTCACTGCTTTTGAGCTTCCACCAAATGGAGCTGTTGGAACAAAGATATTGCAATTCCTTTTCCACTCAAGGTCTGATCTGGTGAACATCAGGAGTATCGATGAAGCTGTAGTGATTGGGGCTGCTCTCTCTCTGTCATCCTCTGCATTTGTTCTACAGCTTCTTGCAGAGAAAGGCGAGCTTCCTACAAGGCTTGGTTCAGCAACCCTTGGGATACTTCTTTTGCAGGACATAGCTGTTGTACCTCTTTTGGTCATACTTCCAGTACTTGAGAGCCAGAATATGACAGAGGGAAGTATTTGGCCCATGCTTGCTCAAGAAAGTTTGAAGGCATTAGGTGGATTGGGCCTGCTTTCTTTTGGAGCAAAGTTTTTTCTCAGAAGAATTTTTGAGGTTGTAGCAGATACAAGAAGTTCAGAGGCTTTTGTCGCTCTTTGCTTGCTGACTATTGCTGGGACTTCACTACTCACACAGAAATTGGGCTTCAGTGATACGCTTGGAGCATTTTTAGCTGGGGCAATCCTAGCAGAGACAAATTTCAGGACCCAGATTGAAGCTGACATAAGACCATTTAGAGGCTTGCTGCTCGGGTTGTTTTTTCTAACTACAGGAACTTCAATTGACATGCAGGTTCTCTTGAGAGAGTGGCCAAATGTACTTGCGCTCTTGGGGGGTTTAATTACTATCAAGACATTGATCATAACTGCAATTGGTCCTCGTGTTGGCCTTACTTTACAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGAGAGTTTGGATTTGTAGTATTCTCTTTGGCGAATAGTCTTGGGGTGCTTCCACTTGAGCTGAACAAGCTGCTCATAATTGTTGTTGTATTGTCAATGGCGTTAACCCCATTTCTGAATGAAGCTGGAAGGAGGGCTGCTAGCTTTATTGAAGACAAATATGATGTTGATAATAAACAGAAAGATCCTGAGATGGTTAACTTCGAAGTTAATGAACCTGTTGTCATCCTTGGATTTGGACAAATGGGCCAGGTCCTTGCCAATTTGCTGTCCAACCCAATGGCTTCAGGGGGAGATGGTGATGCAATAGGATCGACTTATGTGGCATTCGATATTGACCCCAGGGTTGTAAAGACAGCTAGAAAACTTGGTTTTCCTATTCTATATGGGGATGGATCACGTCCAGCTGTTCTTCAATCTGCCGGAATCTCTTCTCCAAAAGCTATCATGATTATGCTCACCGAGAAGGAGAAGTCAATTGAAGCTGTTCAGAGGTTACGATTGGCCTTTCCTGCAGTTCCAATATATGCCAGAGCTCGAGATCTAAAACATCTTTTAGATCTGAAGAAAGCAGGTGCAACAGATGCTACTTTGGAAAAGGCAGAGACTAGCTTACAACTGGGTTCTAAGATGCTGAAAGGTCTCGGGATGATGTCCGATGATGTATCATTTTTGAGTCAGCTTGTTAGAGATTCTATGGAGCTACAAGCTGAAGAAGCAATCAGCCAATCAGAATATCAGGAATCAAATATTATGGAACCATTGCAGGTGAGAGTTGCTGACGTTATGGACTCACGCGTTCCGGTGACAACTAATACACCAAAATATGAAGTATCAGTACCAAACCAGGAAGATCAAGCTTCATTGGGTAGAATTCAGAAGGAAGCAGACCTTGAAGAACAGGATTATGAACTAAATCAAGCTGTTAAATTAGAAGGAAATGGTGCTCCATGTAGCAAACAAGATATCGGAGAAAGCTCGGTGGTTGGATCTGAAGATGATTTAGGACACTAG 2391 0.4245 MLESLLASSQTIKGYDLTKQKSPGYSRAVSRIRTSSMFTHYSVDKQVPFQCQSTAASEKFTRRRPLDAPSFSGRNLSYFSKHRQLRWDRLQTNVTYDVASAVEVINDLGLDTLTFLAVTVFIVPSFKLIKASPILGFFCAGVVLNQFGLIRNLEDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLTQVLLSTLAFTAFELPPNGAVGTKILQFLFHSRSDLVNIRSIDEAVVIGAALSLSSSAFVLQLLAEKGELPTRLGSATLGILLLQDIAVVPLLVILPVLESQNMTEGSIWPMLAQESLKALGGLGLLSFGAKFFLRRIFEVVADTRSSEAFVALCLLTIAGTSLLTQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQVLLREWPNVLALLGGLITIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANSLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEDKYDVDNKQKDPEMVNFEVNEPVVILGFGQMGQVLANLLSNPMASGGDGDAIGSTYVAFDIDPRVVKTARKLGFPILYGDGSRPAVLQSAGISSPKAIMIMLTEKEKSIEAVQRLRLAFPAVPIYARARDLKHLLDLKKAGATDATLEKAETSLQLGSKMLKGLGMMSDDVSFLSQLVRDSMELQAEEAISQSEYQESNIMEPLQVRVADVMDSRVPVTTNTPKYEVSVPNQEDQASLGRIQKEADLEEQDYELNQAVKLEGNGAPCSKQDIGESSVVGSEDDLGH* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3117 796 Gene3D - 532 702 - -
Mtr4g3117 796 Gene3D - 107 506 IPR038770 -
Mtr4g3117 796 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 51 760 - -
Mtr4g3117 796 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 51 760 - -
Mtr4g3117 796 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 533 671 IPR036291 -
Mtr4g3117 796 Pfam Sodium/hydrogen exchanger family 114 499 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr4g3117 796 ProSiteProfiles RCK N-terminal domain profile. 532 664 IPR003148 GO:0006813
Mtr4g3117 796 MobiDBLite consensus disorder prediction 772 796 - -
Mtr4g3117 796 Pfam TrkA-N domain 533 655 IPR003148 GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3117 Mtr-Chr4 44731924 44755919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3117 13 721 Inorganic Solute Cotransporters AT4G04850 72.245 0.0 974
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3117 - - aprc:113858933 1187.17