Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3102 ATGGCTTTTCAAATAAGAAGGGATAATTTGTTCGCAGTATTCTTGTGCATCGGTATGTTAATGACAGTTCAGAGTTCTGAGACTGATATGTACCGTTTAAAATACATTAAGAATTCATTGGAAGATCCGTTTAATGACAAGAGCATCGATTTCCATGAATCGTTCAAGGGCGGTCTTATTGTTGGTTATGTTTTTTCACTCTCTTGTTCTGTTATGCTGACTTGTATGATCTACTCCAAATGTGTGCAATTTAATAAGAGAAAAAACAATAACCTAAACAAAGCTAAAGAATTGGGAAAATATATTTGCTCCATCATGAGCACGAGGACACGAATGGTAACTAATCAGATGCACGAATTGTTACATCCGTGGCTGGCGCGCAAAGAAATCAAAGAGATCTCTATTTTGTTGGGAAGATTGACTTCAACAATATGGTTAGAAGAACTCCGGGACACAACCGACTGTTTTGCTATAGACAACGCCATTGGGGTGGGAAAGATGGGAATGATGTATCAGGGAAATCTACCAAATGGTCAGTTACTAGCCGTTAAGAGACTATCTAACTATCGTCTTTTTGAAAGGCAGTTCCTTTTAGAAACAACTATTATGAGTAGGTACAGACATAAAAATATAGTTCCCATGCTTGGATTCTGCATTGAAGGAAAGGAAAGGCTTTTGGCATATGAATACATGTCAAATGGAAGGCTTTCCAAATGGTTGTACCCTTTGAAAAGTGAAGTCATCCGACTGAAATGGCCTGAGAGGGTCAACATTGCACTTGGATTAGCAAGAGGATTATCATGGCTCCATCATAGCTGTGATTTGGGCATAGTGCATTTTAATATATATTCACAATGCATATTGCTAGATGAGAATTTTGAACCCAAAATATCCAATTTTGGGCAGGCGAAATTTATGAATCCCAACATTGAAGATCATCTCAGCACGATGTTTAAAGTGAATGACGGGAAGAAGGATGTCTACGACTTTGGAAGTGTGCTTTTTGAACTGATTACAGGAAAAACATATAACGAACTGACTCGTTCATCCACCACCACTAATCTCTATGATAACCCTTCAAATTTTTATAATGCCATTGATAAATCTCTGCCTGGGCAAGGATTTGAAAATGGAGTATGTGCTCTCCTAAAGATTGCATGTGAGTGTGTTAAACCTATAAACCAAAGACCAACAATGCTTGAAGTTTACAACAATTTGAGCAATACAAGTAAGTCACAATACGTCTCTAGTGGTGATTCTAACCCAACCGGTGGATCACAAATTGCTTCTGGTATTCTATAG 1302 0.3786 MAFQIRRDNLFAVFLCIGMLMTVQSSETDMYRLKYIKNSLEDPFNDKSIDFHESFKGGLIVGYVFSLSCSVMLTCMIYSKCVQFNKRKNNNLNKAKELGKYICSIMSTRTRMVTNQMHELLHPWLARKEIKEISILLGRLTSTIWLEELRDTTDCFAIDNAIGVGKMGMMYQGNLPNGQLLAVKRLSNYRLFERQFLLETTIMSRYRHKNIVPMLGFCIEGKERLLAYEYMSNGRLSKWLYPLKSEVIRLKWPERVNIALGLARGLSWLHHSCDLGIVHFNIYSQCILLDENFEPKISNFGQAKFMNPNIEDHLSTMFKVNDGKKDVYDFGSVLFELITGKTYNELTRSSTTTNLYDNPSNFYNAIDKSLPGQGFENGVCALLKIACECVKPINQRPTMLEVYNNLSNTSKSQYVSSGDSNPTGGSQIASGIL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3102 433 Pfam Protein tyrosine and serine/threonine kinase 158 356 IPR001245 GO:0004672|GO:0006468
Mtr4g3102 433 MobiDBLite consensus disorder prediction 413 433 - -
Mtr4g3102 433 ProSiteProfiles Protein kinase domain profile. 156 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3102 433 PANTHER RECEPTOR-LIKE PROTEIN 55 45 414 - -
Mtr4g3102 433 Gene3D Transferase(Phosphotransferase) domain 1 231 421 - -
Mtr4g3102 433 Gene3D Phosphorylase Kinase; domain 1 119 230 - -
Mtr4g3102 433 SUPERFAMILY Protein kinase-like (PK-like) 140 406 IPR011009 -
Mtr4g3102 433 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 45 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3102 Mtr-Chr4 44604730 44607179 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3102 46 406 Strubbelig Receptor Gene Family AT4G22130 31.579 2.37e-47 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mtr4g3102 PK_Tyr_Ser-Thr 2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3102 - - mtr:MTR_4g092550 869.381