Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3098 ATGCATTCACAGATCACTATACTAATGGAGAGACTGACTTTAACAATATGGTTGGATGAACTGTGTGACGCAACTGATTGTTTCGCTGTCGACAATGCCATTGGGGTAGGAAAGATGGGAATGATGTACCAAGGATTTCTTCCTAATGGTCAGTTACTGGCTATTAAGAGAATATTTGACTCTCGGCTATTTAAAAGGCAGTTCCTTTTGGAAACAACGATTTTGTGTAAGTACAGACAAAAAAATATAGTTCCCCTGCTTGGGTTCTGCATTAAAGGAAAGGAACAGGTTTTAGCATATGCATACATGTCAAATGGAAGGCTTTCCAAATGGTTGCATCCTTCGGAAAGTGAAGTCATAAGATTGAAATGGCATCAAAGGGTCAACATTGCACTTGGAATAGCAAGAGGGTTATCATGGCTGCATCATAGCTGTGATTTGGGCATAGTGCATTTTAATATATGTTCAGAATGCATATTGCTAGATGAGAATTTTGAACCCAAAATATCCAATTTTGGAGAGGCCAAATTTATGAATCCCAACATTGAAGATCATCTTGGCATGATGTTTAAGGTGGACGACGGGAAGAAGGATGTCTACGACTTTGGAAGTGTGCTTTTTGAATTGATGACAGGGAAAACATATAATGAATTGTCGCGTTCATCTGACACTACTAATCTATGTGGTAACCCTTTGAGTTTTTATAACGTCATTGATAAATCTTTGACCGGGGAAGGACTTGAAAATGAAGTTTGTACTCTCATTAAGATTGCCTGTGAGTGTGTTCACCCTTTTCCAGACCAAAGGCCAACAATGCTTGAAGTTTACAACAATATGAGCAATGTAAGGAAGGGACAAAATAGCTCTGTTAATAATTCTGACAGATTAAGGGGATTAGAATATGCTACTTCAATTACTATAGACGAAATTGTTGAGTTTAAATAA 945 0.3767 MHSQITILMERLTLTIWLDELCDATDCFAVDNAIGVGKMGMMYQGFLPNGQLLAIKRIFDSRLFKRQFLLETTILCKYRQKNIVPLLGFCIKGKEQVLAYAYMSNGRLSKWLHPSESEVIRLKWHQRVNIALGIARGLSWLHHSCDLGIVHFNICSECILLDENFEPKISNFGEAKFMNPNIEDHLGMMFKVDDGKKDVYDFGSVLFELMTGKTYNELSRSSDTTNLCGNPLSFYNVIDKSLTGEGLENEVCTLIKIACECVHPFPDQRPTMLEVYNNMSNVRKGQNSSVNNSDRLRGLEYATSITIDEIVEFK* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3098 314 Pfam Protein kinase domain 30 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3098 314 PANTHER RECEPTOR-LIKE PROTEIN 55 17 287 - -
Mtr4g3098 314 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 17 287 - -
Mtr4g3098 314 Gene3D Phosphorylase Kinase; domain 1 2 102 - -
Mtr4g3098 314 SUPERFAMILY Protein kinase-like (PK-like) 8 277 IPR011009 -
Mtr4g3098 314 ProSiteProfiles Protein kinase domain profile. 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3098 314 Gene3D Transferase(Phosphotransferase) domain 1 103 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3098 Mtr-Chr4 44594388 44595592 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3098 8 294 Receptor kinase-like Gene Family AT3G28450 33.442 6.14e-47 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr4g3098 PK_Tyr_Ser-Thr 1.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3098 - - mtr:MTR_4g092520 638.262