Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3084 ATGGCTTCTCGGAATCAGAACCGGCCTCCTCAAAACCACTCCAATGTTGGATCTGAAGACATTGAGAGACAAAGAGTGTCTGGTAGAGCTAAAGCTAGAGCGCCGTTAACTGCAATGGTGAACAACGCTACTGCGGGTAACATAGAGGGAATCGATTCAAGCATGATTGAATTCACAAAAGATGATATAGAGGCATTGCTTAATGAGAAGATGAAAAAGGGAACTCCTTTTGATAATAAGAAAAAAATGGAGCAGATGGTGGATCTTATTAAGCGGCTTAAGCTTTGTGTTCAATGGTGCGCCAACAAGATTGAAACGCTTCACTCTGAAGTCGAGTCTGCTGTTGAGAAGTGTTCTGCTACTGAGATTGAGATGAAAAATAAGACCGAGGAGCTTCAATCAGATCTCAATTCAGCTAACGAGGCTTATAGAAGACTTGAAACAGAGAAATCAATCATTGTTGAGAGCCTTAATGATACAAGAGATTTTAATAAGGAATTGCAGGATAGATTGAAATCTCTTAAAGATTCACAGAATGAAGCTATAAAGCATAAAGAAATGTTCCGCGAAGAACTAAAAAAAATTACAGATGATCGCGATCGCCTACAAGGAAAACTAAATGAAGTAATGTTAGAACGGGAAAAATACATAAAATTTAAATATGAAACATACTCAAAATTGGATAAATTGGCAAGTAAAACAGAGGCACTTGAGGAGACTTGTTCCTCTCAAAAGGAGAAAATAAATATACTGGAGCAAAAGTTACATGCTGAAAGGGAGAAGTTAGAGATGGCTGATTTATCTGCTATGGAAACAAGAGCAACGTTTGAAGAGCAGAAAAAATTCATTCGTAAACTACAAGATCAATTGGCAGATAAAGAATTTCAAGTAGTTGAAGGAGAAAAGCTAAGGAAAAAACTGCACAACACTGTCTTGGAGCTGAAAGGAAATATTCGTGTGTTTTGTCGTGTGCGACCTTTACTACAAGACCGTTCAGAAACGAAGATGGTTGTTACTTACCCTACGTCAATAGAAATGCTTGGCCGGGGCATTGAGTTGGAACAAAATGCAGGACAGAAACAGCTTTTTACATTTGACAAGGTGTTTAATGATGACGCCTCTCAGCATGACGTTTTTACCGAAATATCACAACTGGTGCAGAGTGCCCTTGATGGCTACAAGGTATGCATTTTTGCTTATGGACAAACGGGTTCAGGAAAAACCCATACAATGATGGGTAGGCCTGACTCTCCAGATCTCAAAGGGATGATACCACTTTCTTTAGAACAGATATTCCAGACCAGTCAATCTCTTAAACACCAGGGCTGGAATTACAAAATGCAGGCATCAGTATTGGAAATATATAATGAGACCATCAAAGATTTGTTATTGTCAAATCGGTCAAGTGGGATTGACCAAACACGAGCAGAAAATAGTGTTCATGGAAAACAGTACACTATTAGACATGACAAAAATGGAAACACACATGTTTTGGACCTCACCATTGTCGATGTTTGTAGTGCCGATGAGATTTCCTCCCTCCTCCAAAAGGCTGCCCAAATCAGGTCAATGGGAAGAACACAAATGAATGAACAATCATCAAGAAGCCACTTTGTCGTTACTTTGCGCATATGTGGTGTAAACGAGAACACTGAACAACAAGTACAAGGTGTCTTAAACCTGATTGATTTGGCTGGAAGTGAAAGACTTTCAAGGAGTGGGGCCACGGGGGAACGTTTGAAGGAAACTCAGGCTATCAACCAAAGTCTCTCCTGTTTGAGCAATGTCATATTTGCTTTGGCAAAGAAAGAAGAGCATGTTCCTTTCAGGGATTCAAAACTTACACACCTACTTCAGCCATGTCTTGAAGGGGATTCCAAAACTTTAATGTTTGTCAACATCTCACCTGATCAATCTTCAATTGACGAGTCACTTTGCTCTCTTCGATTTGCGTCTAGAGTCAATGCGGTGAAATTAGGAATTCACAATGTCAGACCTAGACATCCACTCAATGTTTAG 2019 0.3967 MASRNQNRPPQNHSNVGSEDIERQRVSGRAKARAPLTAMVNNATAGNIEGIDSSMIEFTKDDIEALLNEKMKKGTPFDNKKKMEQMVDLIKRLKLCVQWCANKIETLHSEVESAVEKCSATEIEMKNKTEELQSDLNSANEAYRRLETEKSIIVESLNDTRDFNKELQDRLKSLKDSQNEAIKHKEMFREELKKITDDRDRLQGKLNEVMLEREKYIKFKYETYSKLDKLASKTEALEETCSSQKEKINILEQKLHAEREKLEMADLSAMETRATFEEQKKFIRKLQDQLADKEFQVVEGEKLRKKLHNTVLELKGNIRVFCRVRPLLQDRSETKMVVTYPTSIEMLGRGIELEQNAGQKQLFTFDKVFNDDASQHDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTHTMMGRPDSPDLKGMIPLSLEQIFQTSQSLKHQGWNYKMQASVLEIYNETIKDLLLSNRSSGIDQTRAENSVHGKQYTIRHDKNGNTHVLDLTIVDVCSADEISSLLQKAAQIRSMGRTQMNEQSSRSHFVVTLRICGVNENTEQQVQGVLNLIDLAGSERLSRSGATGERLKETQAINQSLSCLSNVIFALAKKEEHVPFRDSKLTHLLQPCLEGDSKTLMFVNISPDQSSIDESLCSLRFASRVNAVKLGIHNVRPRHPLNV* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3084 672 CDD KISc_C_terminal 315 659 - -
Mtr4g3084 672 Gene3D Kinesin motor domain 260 659 IPR036961 -
Mtr4g3084 672 Coils Coil 111 149 - -
Mtr4g3084 672 PRINTS Kinesin heavy chain signature 392 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr4g3084 672 PRINTS Kinesin heavy chain signature 527 544 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr4g3084 672 PRINTS Kinesin heavy chain signature 558 576 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr4g3084 672 PRINTS Kinesin heavy chain signature 607 628 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr4g3084 672 PANTHER KINESIN-LIKE PROTEIN KLP-3 39 112 - -
Mtr4g3084 672 PANTHER KINESIN-LIKE PROTEIN KLP-3 129 662 - -
Mtr4g3084 672 ProSitePatterns Kinesin motor domain signature. 557 568 IPR019821 GO:0003777|GO:0005524|GO:0007018
Mtr4g3084 672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 276 656 IPR027417 -
Mtr4g3084 672 SMART kinesin_4 315 665 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr4g3084 672 ProSiteProfiles Kinesin motor domain profile. 317 657 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr4g3084 672 Pfam Kinesin motor domain 323 656 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr4g3084 672 Coils Coil 157 212 - -
Mtr4g3084 672 Coils Coil 227 268 - -
Mtr4g3084 672 MobiDBLite consensus disorder prediction 1 32 - -
Mtr4g3084 672 PANTHER KINESIN-LIKE PROTEIN 129 662 - -
Mtr4g3084 672 PANTHER KINESIN-LIKE PROTEIN 39 112 - -
Mtr4g3084 672 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3084 Mtr-Chr4 44497966 44503981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3084 222 657 Calmodulin-binding Proteins AT5G65930 36.591 5.55e-78 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3084 K10405 - gmx:100808278 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3084 4 44497966 44503981 Mtr2g0254 2 2519021 2525833 PCT