Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3064 ATGAAAGAGGTTCCTCTTCTTCTTCTGCTGTTGATTCTTTACTACCCTTCTTGCCACTCACTTGACACCATAACACTGAACCAATCATTGGAAGACAACGATGTTTTGGTCTCCAACCCTCGAGGAACCTTTGCACTTGGTTTCTTCACCTTACAGAAAGATTCTAAAACACGATACCTTGGTATATGGTACAACAAAATTTCAGAACAAACCATTGTTTGGGTTGCAAACAGAGATACTCCTTTGTACAACACTTCCGGTGTTGTCTCCATCAGCAACGGAAACCTCGTACTCAACAACAACCACCTCAACAACAACAAAAACCTTAAACCTATTTGGTCTTCCAATGTTTCTGTTTCACCTTCATTTGGCAATGTTTCAGCTAAGCTTTTAGACAATGGAAACTTTGTTTTGACTCATAACAATGGAAAAAACATTGTATGGCAGAGTTTTGATTATCCAACTAACACTCTACTTCCTTTCATGAAACTTGGGTTGGACCGGAAAACTGGTTTGAACAGGTTCCTAACATCTTGGAAGTCTCCCAATGATCCAGGAACCGGGAATTTGACATACCGGATCGACCCAACCGGGTTTCCACAGCTGTTTCTATACAGCAATAATAAAGTTCCAGTATGGAGAACCGGGTCGTGGACGGGTCAAAGATGGAGCGGAGTACCCGAAATGACTCCGACTTTTATCTTCAATGTTAGTTTTGTTAACAACGTAGATGAAGTTTTTATAGAGTATGGTGTGAAAGATCCAAGGGTGATATCAAGAATGGTTTTAGAAGACTCGGGTCACGTGAGGAGGCTGACGTGGCAACCAAACGAAAACAGATGGTTTCAAATATGGTTTGGTCCGAAAGAGGAATGTGATAATTTCAAGCAATGTGGGTTGAACTCGAATTGTGACCCGTATAATGCGGAAAAATTTGAGTGTGAGTGTTTACCTGGATTTGAACCAAAGTTTGAGAGGGAATGGTATTTGAGAGATGGGTCGGGTGGGTGTGTGAGGAAGTCGAATGTGTCCACGTGTCGAAATGGGGAAGGGTTTGTGAAAGTGGCACGTGTGAAGGTGCCGAATACTTCAATGACACGTGTGAATGAGAGTTTGGGATTGAAGGAGTGTAGAGAGATGTGTTTAGGGGATTGCTCTTGTGTTGCATTTACAAGTGAAAATGAGATGTTGCAAAGTGGGTGTGTTACTTGGCATGGTGATTTGGAGGATACTAGGACTTACACACAAGTTGGACAAGATTTGTATGTACGTGTGGATAAGCATGAATTGGCAATGTATGCAAAACATCCGTATGGTTCTCTTGGCAAAAAGGGAATGGTGGCACTTTTAGTCGTAGGTACTTGCTTGATATTGTTTATGGGGACCATTTTGGTGTATTGGTTTGTAAAAGCAAGGAAAAAATGGTCAAGAAGGGATCGCAAGTTTTCCTTTCGTCTTAGCTTTGGTGGTTCTGATCAACAAGAATTTGACAGTGCAAACAATTCAAATTTACCATTCTATGATCTTAGCTCAGTAGCTGCTGCAACTGACAGTTTTTCAATTGTTAACAAGCTTGGTGAAGGTGGTTTTGGCTCAGTTTATAAGGGTATATTGAGCAATGGAATGGAAATTGCAGTAAAGAGACTGTCAAAGCATTCCGGACAAGGCATAGAAGAGTTTAAAAATGAGGTTGTTTTGATTTCAAAACTTCAACACAGAAATCTTGTGAGGATCTTAGGTTGCTGCGTTCAAGGAGAAGAGAAGATGTTAATCTATGAGTATTTGCCTAACAAAAGCTTAGACTTTTTCATTTTTGATAAATCTAAAAGTTCCGAGCTAGACTGGAGAAAGCGGTTTGATATTATCTGTGGTGTCGCTAGAGGGATCTTATATCTTCATCACGACTCGCGATTAAGAATTATTCATAGAGACTTAAAGGCCAGCAATGTCTTGTTGGACACTGCATTGAACCCAAAAATTGCAGATTTTGGTATGGCTAGAATGTTTGGTGGAGATCAAGTTGAAGCAATTACAAATCGTGTTGTTGGAACCTATGGTTATATGTCTCCGGAGTATGCCATGGAAGGACAATTTTCGGTGAAGTCTGATGTATACAGCTTTGGAGTTTTGCTGCTAGAGATTATTACAGGCAAAAAGAACAGTGGTCAATATGCAGACGATGCATCCACAAATTTAGTTGGACATATATGGGATCTATGGAGAGAAGACAAAGCCATGGGGATTGTTGATCAATCATTAGGAGAGTCATTCTCTGAGCTTGAAGTTCAAAGATGCATCCAAATTGGGCTTTTATGTGTACAAGATTTTGCTGTTGACAGACCATCAATGTCAGCTGTTGTTTCTATGTTGGGTAGTGACTCAACTCTTCCCACTCCAAAACAACCAGCATTCATTTTCAAGAGAAGCAATTATGAGACTTCAAATCCATCAACCAGTGAAGGAACTTACTCAGTAAATGATGCAAGTATGACTATGGTTGAAGCTCGCTAA 2511 0.4034 MKEVPLLLLLLILYYPSCHSLDTITLNQSLEDNDVLVSNPRGTFALGFFTLQKDSKTRYLGIWYNKISEQTIVWVANRDTPLYNTSGVVSISNGNLVLNNNHLNNNKNLKPIWSSNVSVSPSFGNVSAKLLDNGNFVLTHNNGKNIVWQSFDYPTNTLLPFMKLGLDRKTGLNRFLTSWKSPNDPGTGNLTYRIDPTGFPQLFLYSNNKVPVWRTGSWTGQRWSGVPEMTPTFIFNVSFVNNVDEVFIEYGVKDPRVISRMVLEDSGHVRRLTWQPNENRWFQIWFGPKEECDNFKQCGLNSNCDPYNAEKFECECLPGFEPKFEREWYLRDGSGGCVRKSNVSTCRNGEGFVKVARVKVPNTSMTRVNESLGLKECREMCLGDCSCVAFTSENEMLQSGCVTWHGDLEDTRTYTQVGQDLYVRVDKHELAMYAKHPYGSLGKKGMVALLVVGTCLILFMGTILVYWFVKARKKWSRRDRKFSFRLSFGGSDQQEFDSANNSNLPFYDLSSVAAATDSFSIVNKLGEGGFGSVYKGILSNGMEIAVKRLSKHSGQGIEEFKNEVVLISKLQHRNLVRILGCCVQGEEKMLIYEYLPNKSLDFFIFDKSKSSELDWRKRFDIICGVARGILYLHHDSRLRIIHRDLKASNVLLDTALNPKIADFGMARMFGGDQVEAITNRVVGTYGYMSPEYAMEGQFSVKSDVYSFGVLLLEIITGKKNSGQYADDASTNLVGHIWDLWREDKAMGIVDQSLGESFSELEVQRCIQIGLLCVQDFAVDRPSMSAVVSMLGSDSTLPTPKQPAFIFKRSNYETSNPSTSEGTYSVNDASMTMVEAR* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3064 836 ProSiteProfiles Bulb-type lectin domain profile. 21 151 IPR001480 -
Mtr4g3064 836 ProSiteProfiles PAN/Apple domain profile. 346 426 IPR003609 -
Mtr4g3064 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Mtr4g3064 836 SUPERFAMILY Protein kinase-like (PK-like) 504 813 IPR011009 -
Mtr4g3064 836 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 53 831 - -
Mtr4g3064 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 185 IPR036426 -
Mtr4g3064 836 Gene3D Transferase(Phosphotransferase) domain 1 595 799 - -
Mtr4g3064 836 CDD STKc_IRAK 525 790 - -
Mtr4g3064 836 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 53 831 - -
Mtr4g3064 836 Pfam S-locus glycoprotein domain 213 324 IPR000858 GO:0048544
Mtr4g3064 836 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Mtr4g3064 836 Pfam D-mannose binding lectin 71 180 IPR001480 -
Mtr4g3064 836 Gene3D Phosphorylase Kinase; domain 1 493 594 - -
Mtr4g3064 836 Gene3D - 18 151 IPR036426 -
Mtr4g3064 836 CDD PAN_AP_plant 347 425 - -
Mtr4g3064 836 CDD B_lectin 27 154 IPR001480 -
Mtr4g3064 836 Pfam Protein tyrosine and serine/threonine kinase 521 787 IPR001245 GO:0004672|GO:0006468
Mtr4g3064 836 Pfam PAN-like domain 346 410 IPR003609 -
Mtr4g3064 836 PIRSF SRK 2 836 IPR024171 GO:0004674
Mtr4g3064 836 SMART blect_4 27 154 IPR001480 -
Mtr4g3064 836 SMART serkin_6 519 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3064 836 Pfam Domain of unknown function (DUF3403) 793 836 IPR021820 GO:0004674
Mtr4g3064 836 ProSiteProfiles Protein kinase domain profile. 519 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3064 836 SMART ntp_6 347 425 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3064 Mtr-Chr4 44357391 44360999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3064 487 836 Receptor kinase-like Gene Family AT4G11530 56.583 3.50e-133 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g3064 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3064 - - gmx:100812814 1291.17