Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3063 ATGGACTCTGCTAAATATCTTTTCTACCTTGTCAAAGATCATAATCATAAACACAAGTTGTTGGTGCTGCTTTCCTCTTTGATTCTACTACTTCTCACCTCTTTTTGCTCTTGTTCTTCTGATACTATATCTACTGTCAAACCATTAAGAGATGGTGAGCTTCTGATTTCTAAATCTAAAATGTTTTCTCTTGGATTCTTCGCTAAAGGAAAATCCACATCTCGCTATGTAGGAATTTGGTACTACAATTTGTCAATCCAAACTGTTGTTTGGGTTGCAAATAGAGATACTCCAATCAATGACACTTCTGGAATTCTATCAATCAACCCAAATGGAAATCTAGTTCTCAACAACAACCTTAGCACCATTCCCATTTGGTCTACCGATGTTTCACTCCAGCAATCACAGATAAATAGCACCGACGTTATAGCTCAACTATCTGATATAGGAAACTTTGTTTTGATGTTAAACAGAACCAAAACTGTCATATGGGATAGCTTTGATTATCCCACGGACACTTGGCTTCCATATCAAAGGCTTGGTTTTGATAGAAAAACTAATCAAAGCTGGTTCCTTCAATCCTGGAAGACAGAGGATGACCCTGGAAAAGGTGCCTTCACGTTGAAATTCAGCACCGTTGGTAAAACTCAGCTTTTTATGTACAAACATAACCTTCCCTGGTGGCGTGGTGAACCTTGGAATGGAGCACTATTATCAGGTGTGCCTAATGCGAAACGAAATAGGGACACTTTTAACATTTCTTTTGTTCAAGATGACAACAATGTAGCACTCACGTATAACATGGTTGATAAGTCTGTCGTTACTAGGATGGTGGTTCAGCAATCTGGTTTCTTTCAAATATTAATGTGGGACAATAAAAAAAGTCAATGGAACCAGTTCTATTCACAACCAACAAACCAATGTGATAACTATGGAACATGTGGATCAAACAGTAATTGTGACCCTATGAACTTTGCGGACTTCAAATGTGCTTGTTTACCTGGTTTTGAACCCAAATCTCCAGGCGATTGGTATGAGAGTGGAGATGGGTCAGGAGGGTGTGTAAGGAAGAACGGTTCATCTGTTTGTGGGAATGGAGAAGGGTTTATCAAAATTGTCAGCTTGAAAGTTCCTGATACATCGATGGCAAATGCCAAAGGTGGTTTGAGTTTGGAAGAATGTGAAAAAGAATGCTTCAGAAACTGTTCTTGTACAGCCTATGCAGTTGATAATGTGAGCAATGGTGGAAGCGGGTGTTTGGCATGGCATGGTGATTTAATGGACATTCAAAAAGTAAGCGATCAAGGCCAAGATTTATTTTTACGTGTCGATAAAGTTGAACTAGCCAATTACTACAGAAAAAGCAACGGAGTCCCTCATAAGAAAAGGTTGGCTGCAATTTTGGTAGCTTCTATAGTTGCTGTTATCGTCCTCGTCCTCTCCTGTGTGTATTGCAAGTGGAAGAAAAAAACAAAGGATAAAATGGTGCGGCAATTAAACCAAGATTCCTTTGGAGAAAAGAACGGTGTTCAAAGCAACACACATCCAAATCTACCCTTTTTCAGCTTTAAAACGATAATGACAGCTACAAGAAATTGTGGTCATGAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGAAATTGCAGGGTTGCTTGGCTAATGGACAAGAGATAGCAGTGAAAAGATTGTCCAAAAATTCAGGTCAAGGAAAAGAAGAGTTTAAAACTGAAGTTACGCTTTTAGTTAAACTCCAACACAGAAATCTAGTGAGGTTGCTCGGTTGTTGCTTTGAAAAAGAAGAAAGGATGTTAGTTTATGAATACCTACCAAACAAAAGCCTGGACTTCTTTATATTCGATCAAAACCAAAGGTCATTATTGGATTGGGGTAAGCGTTTTGAAATTATTTGTGGCATTGCTCGAGGTGTTTTATATCTTCATCAAGATTCAAGGCTGAAAATAATTCATAGAGATCTAAAAGCCAGCAATGTTCTCCTTGATGCTGCAATGAATCCCAAAATCTCAGATTTTGGTATGGCTAGAATATTTGGAGAAGATGAAATACAAGCAAGAACAAAAAGAGTGGTTGGAACATATGGATATATGTCACCGGAATATGCAATGGAAGGACGATATTCAACTAAATCGGATGTCTTCAGTTTTGGTGTTTTACTACTGGAGATTATTGCTGGCCAAAGAAACACACATTGTGAAACAGGAAGAGACTCCCCAAATTTAATTGGACATGTGTGGACACTATGGACAGAAGGAAGGGCCTTGGATACAGTTGATCCAGCACTAAACCAGTCTTATCCTTCTGCTATAGTACTGAGATGCATTCAAATAGGACTTTTGTGTGTGCAAGAAAATGCAATTAATAGACCATCAATGTTAGATGTTGTTTTCATGCTATGCAATGAAACACCTCTTCTCCCACCTCTAAAACCAGCATTTTTATTCAATGGCAACCATGAATTGCAAGAACCATCAACATCAGGATCTTCAATAAATGAATTAACAGAAACTACCATCAGTGCTCGCTAA 2553 0.3846 MDSAKYLFYLVKDHNHKHKLLVLLSSLILLLLTSFCSCSSDTISTVKPLRDGELLISKSKMFSLGFFAKGKSTSRYVGIWYYNLSIQTVVWVANRDTPINDTSGILSINPNGNLVLNNNLSTIPIWSTDVSLQQSQINSTDVIAQLSDIGNFVLMLNRTKTVIWDSFDYPTDTWLPYQRLGFDRKTNQSWFLQSWKTEDDPGKGAFTLKFSTVGKTQLFMYKHNLPWWRGEPWNGALLSGVPNAKRNRDTFNISFVQDDNNVALTYNMVDKSVVTRMVVQQSGFFQILMWDNKKSQWNQFYSQPTNQCDNYGTCGSNSNCDPMNFADFKCACLPGFEPKSPGDWYESGDGSGGCVRKNGSSVCGNGEGFIKIVSLKVPDTSMANAKGGLSLEECEKECFRNCSCTAYAVDNVSNGGSGCLAWHGDLMDIQKVSDQGQDLFLRVDKVELANYYRKSNGVPHKKRLAAILVASIVAVIVLVLSCVYCKWKKKTKDKMVRQLNQDSFGEKNGVQSNTHPNLPFFSFKTIMTATRNCGHENKLGQGGFGSVYKKLQGCLANGQEIAVKRLSKNSGQGKEEFKTEVTLLVKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDQNQRSLLDWGKRFEIICGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDEIQARTKRVVGTYGYMSPEYAMEGRYSTKSDVFSFGVLLLEIIAGQRNTHCETGRDSPNLIGHVWTLWTEGRALDTVDPALNQSYPSAIVLRCIQIGLLCVQENAINRPSMLDVVFMLCNETPLLPPLKPAFLFNGNHELQEPSTSGSSINELTETTISAR* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3063 850 Gene3D Hepatocyte Growth Factor 361 441 - -
Mtr4g3063 850 PIRSF SRK 13 850 IPR024171 GO:0004674
Mtr4g3063 850 SUPERFAMILY Protein kinase-like (PK-like) 514 822 IPR011009 -
Mtr4g3063 850 CDD STKc_IRAK 539 809 - -
Mtr4g3063 850 Gene3D Phosphorylase Kinase; domain 1 507 611 - -
Mtr4g3063 850 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 23 848 - -
Mtr4g3063 850 Gene3D Transferase(Phosphotransferase) domain 1 612 812 - -
Mtr4g3063 850 Pfam Protein tyrosine and serine/threonine kinase 536 804 IPR001245 GO:0004672|GO:0006468
Mtr4g3063 850 ProSiteProfiles Bulb-type lectin domain profile. 40 167 IPR001480 -
Mtr4g3063 850 MobiDBLite consensus disorder prediction 829 850 - -
Mtr4g3063 850 ProSiteProfiles EGF-like domain profile. 304 342 IPR000742 -
Mtr4g3063 850 SMART ntp_6 364 443 IPR003609 -
Mtr4g3063 850 ProSiteProfiles Protein kinase domain profile. 533 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3063 850 ProSiteProfiles PAN/Apple domain profile. 363 444 IPR003609 -
Mtr4g3063 850 Gene3D - 34 167 IPR036426 -
Mtr4g3063 850 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 201 IPR036426 -
Mtr4g3063 850 Pfam PAN-like domain 363 429 IPR003609 -
Mtr4g3063 850 PANTHER - 23 848 - -
Mtr4g3063 850 CDD PAN_AP_plant 364 443 - -
Mtr4g3063 850 SMART serkin_6 536 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3063 850 SMART blect_4 46 170 IPR001480 -
Mtr4g3063 850 CDD B_lectin 46 170 IPR001480 -
Mtr4g3063 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Mtr4g3063 850 Pfam D-mannose binding lectin 88 196 IPR001480 -
Mtr4g3063 850 Pfam S-locus glycoprotein domain 228 340 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3063 Mtr-Chr4 44353246 44357320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3063 476 823 Receptor kinase-like Gene Family AT4G23140 53.803 2.29e-120 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g3063 PK_Tyr_Ser-Thr 3.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3063 - - mtr:MTR_4g091840 1319.68