Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3061 ATGGAGTCTCTTGAAAATCTTCTCTGCAAGATGCTGGTTTTGCATATCTATTTTCTACTCCTCACATTCTCTTTTTGCTCTTGTTCTTCTGATACCATATCTATCGACAAAACCTTAAGAGATGGTGAACTTCTTGTTTCTAAATCTAAAACCTTTGCTCTTGGATTCTTCACTCCAGGAAAGTCCGCCTCTCGCTATGTTGGAATTTGGTACTACAATTTGCCAATCCAAACTGTTGTTTGGGTTGCAAACAGAGATGCTCCCATCAATGACACTTCTGGGATTTTATCCATTGACCCAAATGGAAATCTAGTAATTCACCACAACCATAGCACCATTCCCATTTGGTCTACCGATGTTTCATTTCCACAATCACAAAGAAATAGCACCAATGCTGTTATAGCGAAATTATCAGACATAGCAAACCTTGTTCTGATGATAAACAACACAAAAACTGTCATCTGGGAAAGCTTTGATCATCCCACAGACACCTTGCTTCCATATCTAAAGATAGGGTTTAATAGAAAAACTAATCAAAGCTGGTTCCTTCAATCCTGGAAGACAGATGATGACCCTGGAAAAGGTGCGTTCACGGTGGAATTCAGCACCATTGGTAAACCTCAGTTGTTTATGTACAACCATAACCTTCCATGGTGGCGTGCTGGACATTGGAATGGAGAACTGTTTGCAGGTGTACCTAATATGAAACGAGATATGGAAACTTTTAACGTTTCTTTTGTGGAAGATGAAAACTCCGTAGCAATCTCATATAACATGTTTGATAAGTCTGTCATCGCTAGGAAAGTTGTTAATCAATCTGGTTTCTTTCAAATATTCACGTGGGGGAATGAAAAGAATCAATGGAACCGGTTCTATTCAGAACCAACAGACCAATGTGATAACTATGGAACATGTGGATCAAACAGTAATTGTGACCCTTTTAACTTTGACGACTTTAAGTGCACTTGTTTACTTGGTTTTGAACCAAAATTTCCACGTGATTGGTATGAGAGTAGAGATGGGTCGGGAGGGTGTGTAAGGAAGAAAGGTGCATCTATTTGTGGGAATGGAGAAGGGTTTATAAAAGTTGTAAGTGTGAAAGTTGCTGATATATCTGGAGCAGTTGCCATAGATGGTTTGAGTTTGGAAGAATGTGAGAAAGAATGCTTGAGAAATTGCTCTTGTACTGCCTATGCAGTTGCTGATGTGAGGAATGGTGGTAGTGGATGTTTGGCATGGCATGGGGATTTAATGGACATTCAAAAACTTAGTAGTGATCAAGGCCAAGATTTATTTTTACGCGTCGATAAAGTTGAACTAGCTAATTACAACAAAAAAAGCAAAGGAGCACTTGACAAAAAGAGGTTGGCTGCAATTCTGGTAGCTTCTATTGTTGCAATTGTCATCCTCCTCTCCTGTGTAAATTACATGTGGAAGAAAAAAACAAAGGATAAAATGATGCGGCAAATAAACCATGACTCCTCAGTAGAAGAGAATGGTGCTCCAAACAACAGACATCCAAATCTACCCTTTTTCAGCTTTAAAACGATAATGACAGCTACAAAAAATTGTGATCATAAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTACAAGGGTTGCTTGGTTAATGGACAAGAGATTGCAGTTAAAAGATTGTCCAGAGATTCTGGTCAAGGCAAAGTAGAGTTTAAAAATGAAATTACACTTTTAGTTAAACTCCAACACAGAAATCTAGTGAGGTTGCTCGGTTGTTGCTTTGAAAAAGAAGAAAGGATGTTAGTTTATGAATACCTACCAAACAAAAGCCTAGACTTCTTTATATTCGATCAAAACCAAAGGTCATCATTGGATTGGGTAAAGCGTTTTGAAATCATTTGTGGGATTGCTCGAGGTGTTTTATATCTTCACCAAGATTCAAGGCTGAAAATAATTCATAGAGATCTAAAAGCCAGCAATGTTCTCCTTGACGCTGCAATGAATCCCAAAATCTCAGATTTTGGTATGGCTAGAATATTTGGAGAAGATGAAATCCAAGCAAGAACAAAAAGAGTGGTCGGAACATATGGATATATGTCACCAGAATATGCAATGGAAGGACGATATTCAACAAAATCTGATGTCTTCAGTTATGGGGTCTTACTACTGGAGATTATTGCTGGCAAGAGAAACACACATTGTGAAATTGGAAGAGACTCCCCAAATTTAATTGGACATGTGTGGACACTATGGACAGAAGAAAGAGCCTTGGATATTGTTGATCCAGCACTAAACCAGTCTTATCCTCTTGATATAGTTCTGAGATGCATTCAAATTGGACTTTTGTGTGTGCAAGAAAATGCAATTAATAGACCATCAATGTTAGAAATTGTTTTCATGCTATGCAATGAAACACCTCTCTGCCCACCTCAAAAACCAGCATTTTATTCAATGGCAACCATGAATTGCAAGAACCATCAACATCAGGATCTTCAAACATTTCTAGAGGTTCTTGAGAAACAAAAAAACTCAATGGACTCTGCTAAAAATCTTCTCTACCTTAGCACAGTCGAAAATCATAAAAACAAATTGTTAGTGTTAGATTACTCTTTGATTCTACTATGTCTCACCTTATCTTTTTGCCCTTGTTCTTCTGATACCATAACTATTCACAAACCCATAAGAGATGGTGAACTTCTCATTTCTAAATCTAAAACATTTGCTCTTGGATTCTTCACTCCAGGAAAGTCCACCTCTCGCTATGTTGGAATCTGGTACAACAATTTGCCGATCCAAACTGTTGTTTGGGTTGCAAATAGAGATGCTCCCATCAATGACACTTCTGGAATTCTATCAATCAACCAAAATGGGAATCTAGAACTCCACCACAACCTTAGCACCATTCCCATTTGGTCTACCAATGTTTCATTAACACAGTCACAAAGAAATAACACCAATGTTATAGCTCAACTATTGGATATAGGAAACCTTGTTCTGAGGTTAAACGACACCGAAACTGCCATCTGGGAAAGCTTTGATCATCCCACAGACACAATGCTTCCGTATCAAAAGATTGGTTTTGATAGAAAAATTAATCAAAGTTGGGTCCTTCAATCCTGGAAGACAGATGATGACCCTGGAAAAGGTGCGTTCACGGTGAAATTCAGCACCATTGGCAAACCACAATTGTTTATGTACAACCATGATCGTCCTTGGTGGCGTGGTGGACATTGGAATGGAGCAATATTAGTAGGCCTACCTCATATGATAGGAGATATGGCAGTTCGTAATGTTTCTTGGGTTGAAGATGACAACTATGTATCACTCTCATATAACATGTTTAATAAGTCTGTCATTACAAGGATAGTGGTTCAGCAATCTGGTTTCTTTCAAACATTCATGTGGGACAGTCAAGAGAGTCAATGGAGCCGGTACTGGTCTGAACCAACAGACCAATGTGCTAACTACGGAACATGTGGACCAAACAGTAATTGTGACCCTTTGAACTTTGAGAGCTTTAAGTGTACTTGTTTACTTGGTTTTGAACCAAAATTTCCACGTGATTGGTATGAGAGTAGAGATGGGTTGGGAGGATGTGTAAGAAAAAGAGGTGCATCTGTTTGTGGGAATGGAGAAGGGTTTAACAAAGTTTTAAGGGTGAAAGTTCCTGATATATCTGGGGCAGTTGCCATAGATGGTTTGACTTTGGAAGAATGTGAGAAAGATTGCTTGAGAAACTGTTCTTGTAATGCCTATGCAGTTGCTGATGTGAGGAATGGTGGTAGTGGATGTTTGACGTGGCATGGGAATTTAATGGACATTCAAAAACTTAGTAATCAGGGCCAAGATTTATTTTTGCGCGTCGAGAAAGTTGAACTTGCTAATTACAACAAAAAAAGCAAAGGAGTCCTTGATAAAAAGAGGTTAGCTGCAATTCTTGTAGCTTCTATAGTTGCAATTGTCATCCTCCTCTTCTGTGTGAATTACATGTGGAAGAAAAAGAGAAAGGATAAAATGATGCCGCAACCAAACCAAGATTCCTCTGGGGAAGAGAATGATACCCAAAGCAACACGCATCCAAATCTACCCTTTTTCAGCTTTAAAACGATAATGACAGCTACAAGAAATTGTGATCTTGAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGCTTTTTGGAAAATGGACAAGAGATAGCAGTGAAAAGATTGTCCAGAGATTCTGGTCAAGGCAAAGAAGAGTTTAAGAATGAAATTAAACTTTTAGTTAAACTCCAACACAGAAATCTAGTGAGGTTGCTCGGTTGTTGCTTTGAAAAAGAAGAAAGGATGCTAGTTTACGAATACCTATCAAACAAAAGCCTAGACTTCTTTATATTCGATCAAAACCAAAGGTCATCATTGGATTGGGTTACGCGTTTTGAAATTATTTGTGGGATTGCTCGAGGTGTATTATATCTTCATCAAGATTCAAGGCTGAAAATAATCCATAGAGATCTAAAAGCCAGCAACGTTCTCCTTGATGCTGTAATGAATCCCAAAATCTCGGATTTTGGTATGGCTAGAATATTTGGAGAAGATGAAATTCAAGCTAGAACAAAAAGAGTTGTTGGAACATATGGATATATGTCTCCGGAATATGCAATGCAAGGACGATATTCAACAAAATCTGATGTCTTCAGTTATGGGGTCTTACTACTGGAGATTATTGCTGGCAAGAGAAACACACATTGTGAGACAGGAAGAGACTCCCCAAATTTAATTGGACATGTGTGGACACTATGGACAGAAGGAAAAGCCTTGGATATGGTTGATCAAGCACTAAACCATTATTATTCTTCTGCTATAGTTCTAAGATGCATTCAAATTGGACTCTTGTGTGTGCAAGAAAATGCAATTAATAGACCGTCAATGTTAGATGTTGTTTTCATGCTATGCAATGAAACACCTCTTTGCCCACCTCAAAAACCAGCATTTTTATTCAATGTACGCCAAGATTTGCCAGAGTCGTCAACTTCAGGAGGAGGATCTTCAATAAATGAACTAACAGAAACTACCATCAGCGCTCGCTGA 5064 0.3851 MESLENLLCKMLVLHIYFLLLTFSFCSCSSDTISIDKTLRDGELLVSKSKTFALGFFTPGKSASRYVGIWYYNLPIQTVVWVANRDAPINDTSGILSIDPNGNLVIHHNHSTIPIWSTDVSFPQSQRNSTNAVIAKLSDIANLVLMINNTKTVIWESFDHPTDTLLPYLKIGFNRKTNQSWFLQSWKTDDDPGKGAFTVEFSTIGKPQLFMYNHNLPWWRAGHWNGELFAGVPNMKRDMETFNVSFVEDENSVAISYNMFDKSVIARKVVNQSGFFQIFTWGNEKNQWNRFYSEPTDQCDNYGTCGSNSNCDPFNFDDFKCTCLLGFEPKFPRDWYESRDGSGGCVRKKGASICGNGEGFIKVVSVKVADISGAVAIDGLSLEECEKECLRNCSCTAYAVADVRNGGSGCLAWHGDLMDIQKLSSDQGQDLFLRVDKVELANYNKKSKGALDKKRLAAILVASIVAIVILLSCVNYMWKKKTKDKMMRQINHDSSVEENGAPNNRHPNLPFFSFKTIMTATKNCDHKNKLGQGGFGSVYKGCLVNGQEIAVKRLSRDSGQGKVEFKNEITLLVKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDQNQRSSLDWVKRFEIICGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDEIQARTKRVVGTYGYMSPEYAMEGRYSTKSDVFSYGVLLLEIIAGKRNTHCEIGRDSPNLIGHVWTLWTEERALDIVDPALNQSYPLDIVLRCIQIGLLCVQENAINRPSMLEIVFMLCNETPLCPPQKPAFYSMATMNCKNHQHQDLQTFLEVLEKQKNSMDSAKNLLYLSTVENHKNKLLVLDYSLILLCLTLSFCPCSSDTITIHKPIRDGELLISKSKTFALGFFTPGKSTSRYVGIWYNNLPIQTVVWVANRDAPINDTSGILSINQNGNLELHHNLSTIPIWSTNVSLTQSQRNNTNVIAQLLDIGNLVLRLNDTETAIWESFDHPTDTMLPYQKIGFDRKINQSWVLQSWKTDDDPGKGAFTVKFSTIGKPQLFMYNHDRPWWRGGHWNGAILVGLPHMIGDMAVRNVSWVEDDNYVSLSYNMFNKSVITRIVVQQSGFFQTFMWDSQESQWSRYWSEPTDQCANYGTCGPNSNCDPLNFESFKCTCLLGFEPKFPRDWYESRDGLGGCVRKRGASVCGNGEGFNKVLRVKVPDISGAVAIDGLTLEECEKDCLRNCSCNAYAVADVRNGGSGCLTWHGNLMDIQKLSNQGQDLFLRVEKVELANYNKKSKGVLDKKRLAAILVASIVAIVILLFCVNYMWKKKRKDKMMPQPNQDSSGEENDTQSNTHPNLPFFSFKTIMTATRNCDLENKLGQGGFGSVYKGFLENGQEIAVKRLSRDSGQGKEEFKNEIKLLVKLQHRNLVRLLGCCFEKEERMLVYEYLSNKSLDFFIFDQNQRSSLDWVTRFEIICGIARGVLYLHQDSRLKIIHRDLKASNVLLDAVMNPKISDFGMARIFGEDEIQARTKRVVGTYGYMSPEYAMQGRYSTKSDVFSYGVLLLEIIAGKRNTHCETGRDSPNLIGHVWTLWTEGKALDMVDQALNHYYSSAIVLRCIQIGLLCVQENAINRPSMLDVVFMLCNETPLCPPQKPAFLFNVRQDLPESSTSGGGSSINELTETTISAR* 1688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3061 1687 ProSiteProfiles Bulb-type lectin domain profile. 30 158 IPR001480 -
Mtr4g3061 1687 SMART ntp_6 1203 1282 IPR003609 -
Mtr4g3061 1687 SMART ntp_6 355 435 IPR003609 -
Mtr4g3061 1687 MobiDBLite consensus disorder prediction 1332 1352 - -
Mtr4g3061 1687 ProSitePatterns Protein kinases ATP-binding region signature. 1377 1399 IPR017441 GO:0005524
Mtr4g3061 1687 Pfam D-mannose binding lectin 78 187 IPR001480 -
Mtr4g3061 1687 Pfam D-mannose binding lectin 927 1035 IPR001480 -
Mtr4g3061 1687 Gene3D Hepatocyte Growth Factor 1200 1280 - -
Mtr4g3061 1687 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Mtr4g3061 1687 CDD STKc_IRAK 1377 1644 - -
Mtr4g3061 1687 SUPERFAMILY Protein kinase-like (PK-like) 1352 1659 IPR011009 -
Mtr4g3061 1687 CDD STKc_IRAK 530 797 - -
Mtr4g3061 1687 Pfam S-locus glycoprotein domain 219 331 IPR000858 GO:0048544
Mtr4g3061 1687 Pfam S-locus glycoprotein domain 1067 1179 IPR000858 GO:0048544
Mtr4g3061 1687 Gene3D Phosphorylase Kinase; domain 1 1345 1446 - -
Mtr4g3061 1687 Gene3D Phosphorylase Kinase; domain 1 499 599 - -
Mtr4g3061 1687 CDD PAN_AP_plant 1203 1282 - -
Mtr4g3061 1687 Gene3D - 873 1007 IPR036426 -
Mtr4g3061 1687 Gene3D - 24 158 IPR036426 -
Mtr4g3061 1687 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 865 1684 - -
Mtr4g3061 1687 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 12 822 - -
Mtr4g3061 1687 SMART serkin_6 1371 1618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3061 1687 SMART serkin_6 524 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3061 1687 Pfam Protein tyrosine and serine/threonine kinase 1373 1638 IPR001245 GO:0004672|GO:0006468
Mtr4g3061 1687 Pfam Protein tyrosine and serine/threonine kinase 527 793 IPR001245 GO:0004672|GO:0006468
Mtr4g3061 1687 ProSiteProfiles Bulb-type lectin domain profile. 879 1006 IPR001480 -
Mtr4g3061 1687 ProSiteProfiles Protein kinase domain profile. 524 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3061 1687 ProSiteProfiles PAN/Apple domain profile. 354 436 IPR003609 -
Mtr4g3061 1687 PANTHER - 865 1684 - -
Mtr4g3061 1687 PANTHER - 12 822 - -
Mtr4g3061 1687 SMART blect_4 36 161 IPR001480 -
Mtr4g3061 1687 SMART blect_4 885 1009 IPR001480 -
Mtr4g3061 1687 SUPERFAMILY alpha-D-mannose-specific plant lectins 928 1040 IPR036426 -
Mtr4g3061 1687 ProSiteProfiles Protein kinase domain profile. 1371 1656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3061 1687 MobiDBLite consensus disorder prediction 1665 1687 - -
Mtr4g3061 1687 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 192 IPR036426 -
Mtr4g3061 1687 CDD B_lectin 36 161 IPR001480 -
Mtr4g3061 1687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Mtr4g3061 1687 SUPERFAMILY Protein kinase-like (PK-like) 505 817 IPR011009 -
Mtr4g3061 1687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1492 1504 IPR008271 GO:0004672|GO:0006468
Mtr4g3061 1687 Pfam PAN-like domain 1202 1268 IPR003609 -
Mtr4g3061 1687 Pfam PAN-like domain 354 420 IPR003609 -
Mtr4g3061 1687 ProSiteProfiles PAN/Apple domain profile. 1202 1283 IPR003609 -
Mtr4g3061 1687 ProSiteProfiles EGF-like domain profile. 1143 1181 IPR000742 -
Mtr4g3061 1687 ProSiteProfiles EGF-like domain profile. 295 333 IPR000742 -
Mtr4g3061 1687 CDD B_lectin 887 1009 IPR001480 -
Mtr4g3061 1687 MobiDBLite consensus disorder prediction 1336 1352 - -
Mtr4g3061 1687 Gene3D Transferase(Phosphotransferase) domain 1 1447 1647 - -
Mtr4g3061 1687 Gene3D Transferase(Phosphotransferase) domain 1 600 800 - -
Mtr4g3061 1687 CDD PAN_AP_plant 355 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3061 Mtr-Chr4 44329102 44341607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3061 444 810 Receptor kinase-like Gene Family AT4G23190 50.404 5.13e-115 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g3061 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3061 - - aprc:113859914 2433.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3061 4 44329102 44341607 Mtr2g0274 2 2677535 2681802 PCT