Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3060 ATGGAACATGTGGATCAAATGGTAATTGTGACCCTTTTAACTTTGATGACTTTAAGTGTTCTTGTTTACTTGGTTATGAACCCAAATTTCCACGTGATTGGTATCAGAATAGAAGATGGGACGGGAGGGTGTGTAAGGAAGAAAGGCTCGTCTGTTTGTGAGAATGGAGAAGGGTTTATCAAAGTTGTAAGCTTGAAAGTTCCTGATACATCTGTGGCAGTTGCTAAAAGTGGTTTGAGTTTGGAAGAATGTGAGAAAGAATGCTTGCAAAACTGTTCTTGTACTGCCTATTCAATTGCTGATGTGAGGAATGGTGGAAGTGGATGTTTGGCATGGCATGGGGATTTAATAGACATTCAAAAACTTAATGATCAAGGCCAAGATTTATTTCTACGCGTCGATAAAATTGAACTAGCCAATTACTACAGAAAACGAAAAGGAGTTCTTGATAAAAAGAGGTTGGCTGCAATTCTTGTAGCTTCTATAATTGCAATTGTCCTCCTCCTCTCCTGTGTGAACTACATGTGGAAGAAAAAAAGGGAGGGAAAGTCCACCTCTCGCTATGTTGGAATCTGGTACAACAATTTGCCGATCCAAACTGTTGTTTGGGTTGCAAATAGAGATGCTCCCATCAATGACACTTCTGGAATTCTATCAATCAACCAAAATGGGAATCTAGAACTCCACCACAACCTTAGCACCATTCCAATTTGGTCCACTAATGTTTCATTAACACTATCACAAAGAAATATCACTAGTGCTGTTATAGCAAAATTAACAGACAAAGCAAACATTGTTCTGATGATAAACAACACAAAAACTGTCATTTGGGAAAGCTTTGATCATCCCACAGACACCTTCCTTCCATATCAAAGGTTTGGTTTTGATAGAAAAACTAATCAAAGTTGGCCCCTTCAATCCTGGAAGACAGAAGATGACCCTGGAAAAGGTGCATTCACGGTGAAATTCAGCAGCATAGGTATACCTCAGTTGTTTATGTACAACCATAACCTTCCATGGTGGCGTGGTGGACATTGGAACGGAGCACTATTTGTAGGTATACCTAATATGAAACGAGATTTGCAAACTTTTAATGCTTCTTTTGTGGAAGAAGATAACTATGTAGCACTTTCATACGACATGTTTGATAAGTCTGTCATAGCTAGGTTAGTTGTTCAGCAATCTGGTTTCATTCAAATATTCACTTGGAACAATCAAAAGAGTCAATGGAACAGGTTCTGGTCAGAACCAACAAACCAATGTGATAACTATGGAACGTGTGGATCAAACAGTAATTGTGACCCTTTGAACTTTGAGAACTTTAAGTGCACGTGTTTACTTGGTTTTGAACCAAAATTTCCAAGCGATTGGTATGAGAGTAGAGATGGGTCGGGAGGGTGTGTAAGGAAGAAAGGTGCATCTGTCTGTGGGAATGGCGAAGGGTTTATCAAAGTTGTAAGCTTGAAAGTTCCTGATATATCTGGGGCAGTTACCATAGATGGTTTGAGTTTGGATGAATGTGAGAAAGAATGCTTGAGAAACTGCTCCTGTACTTCCTATGCAGTAGCCGATGTGAGGAATGGTGGTAGTGGATGTTTGGCATGGCATGGGGATTTAATGGACATTCAAAAACTTAGTGATCAAGGCCAAGATTTATATTTGCGCGTCGATAAAGTTGAACTTGCTAATTACAACAAAAAAAGCAAAGGAGTCCTTGATAAAAAGAGGTTGGCTGTAATTATGGTAGTTTCAATAGTTGCAATCGTCATTCTCCTCTCTTGTGTGAATTACATGTGGAAGAAAAAAAGAAAGGTGATGCAGCAATCAAAAGAAGATTACTCTGCAGAAGAGAATGATGCTCAAAGCACCACACATCCAAATCTACCCTTTTTCAGCCTTAAAACGATAATGTCAGCTACAAGATATTGCAGTCATCAGAATAAGCTTGGGAAAGGTGGATTTGGCTCTGTTTATAAGGGTTGCTTGGTTAATGGACAAGAGATAGCAGTGAAAAGATTGTCCAAAGAATCAGGTCAAGGCAAAGTAGAGTTTAAAAATGAAATTACACTTTTAGTTAAGCTCCAGCACAGAAATCTAGTAAGGTTGCTTGGTTGTTGCTTCGAAAAAGAAGAAAGAATGCTAGTTTATGAATACCTACCAAACAAAAGCCTAGACTTCTTTATATTCGATCAAAACCAAAGGTCATCATTGGATTGGGGTAAGCGTTTTGAAATTATTTGTGGCATTGCTCGAGGTGTTTTATATCTTCACCAAGATTCAAGGCTGAAAATAATTCATAGAGATCTAAAAGCCAGCAATGTTCTCCTTGATGCTGAAATGAATCCCAAAATCTCAGATTTCGGTATGGCTAGAATATTTGGAGAAGATGAAATCCAAGCAAGAACAAAAAGAGTGGTCGGAACATATGGATACATGTCACCCGAATATGCAATGGAAGGACGATATTCAACAAAATCTGATGTCTTCAGTTATGGGGTCTTACTACTGGAGATTATTGCTGGCAAGAGAAACACACATTGTGAAATTGGAAGAGACTCCCCAAATTTAATTGGACATGTGTGGACTGTATGGACAGAAGAAAGGGCCTTGGATATAGTTGATGAAGCACTAAACCAGTCTTATCCCCCTGCTATAGTTCTGAGATGCATTCAAATTGGACTCTTGTGTGTGCAAGAAAATGCGATGAATAGACCATCAATGTTAGAAGTGGTTTTTATGCTAGCCAATGACACGCCTCTTTGCGCACCTCAAAAACCAGCATTTTTATTCAACGACGACAAAGATTTGCAAGAGTCATCAACGTCAGGAGGAGGATCTTCAATAAATGAAGTAACTGAAACTACCATCATCGCTCGCTAA 2880 0.3896 MEHVDQMVIVTLLTLMTLSVLVYLVMNPNFHVIGIRIEDGTGGCVRKKGSSVCENGEGFIKVVSLKVPDTSVAVAKSGLSLEECEKECLQNCSCTAYSIADVRNGGSGCLAWHGDLIDIQKLNDQGQDLFLRVDKIELANYYRKRKGVLDKKRLAAILVASIIAIVLLLSCVNYMWKKKREGKSTSRYVGIWYNNLPIQTVVWVANRDAPINDTSGILSINQNGNLELHHNLSTIPIWSTNVSLTLSQRNITSAVIAKLTDKANIVLMINNTKTVIWESFDHPTDTFLPYQRFGFDRKTNQSWPLQSWKTEDDPGKGAFTVKFSSIGIPQLFMYNHNLPWWRGGHWNGALFVGIPNMKRDLQTFNASFVEEDNYVALSYDMFDKSVIARLVVQQSGFIQIFTWNNQKSQWNRFWSEPTNQCDNYGTCGSNSNCDPLNFENFKCTCLLGFEPKFPSDWYESRDGSGGCVRKKGASVCGNGEGFIKVVSLKVPDISGAVTIDGLSLDECEKECLRNCSCTSYAVADVRNGGSGCLAWHGDLMDIQKLSDQGQDLYLRVDKVELANYNKKSKGVLDKKRLAVIMVVSIVAIVILLSCVNYMWKKKRKVMQQSKEDYSAEENDAQSTTHPNLPFFSLKTIMSATRYCSHQNKLGKGGFGSVYKGCLVNGQEIAVKRLSKESGQGKVEFKNEITLLVKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDQNQRSSLDWGKRFEIICGIARGVLYLHQDSRLKIIHRDLKASNVLLDAEMNPKISDFGMARIFGEDEIQARTKRVVGTYGYMSPEYAMEGRYSTKSDVFSYGVLLLEIIAGKRNTHCEIGRDSPNLIGHVWTVWTEERALDIVDEALNQSYPPAIVLRCIQIGLLCVQENAMNRPSMLEVVFMLANDTPLCAPQKPAFLFNDDKDLQESSTSGGGSSINEVTETTIIAR* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3060 959 SUPERFAMILY alpha-D-mannose-specific plant lectins 201 314 IPR036426 -
Mtr4g3060 959 Gene3D - 191 347 - -
Mtr4g3060 959 ProSitePatterns Serine/Threonine protein kinases active-site signature. 764 776 IPR008271 GO:0004672|GO:0006468
Mtr4g3060 959 SMART serkin_6 643 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3060 959 CDD PAN_AP_plant 477 556 - -
Mtr4g3060 959 Pfam PAN-like domain 53 119 IPR003609 -
Mtr4g3060 959 Pfam PAN-like domain 476 542 IPR003609 -
Mtr4g3060 959 PANTHER - 185 957 - -
Mtr4g3060 959 PANTHER - 37 168 - -
Mtr4g3060 959 ProSiteProfiles PAN/Apple domain profile. 476 557 IPR003609 -
Mtr4g3060 959 MobiDBLite consensus disorder prediction 936 959 - -
Mtr4g3060 959 SUPERFAMILY Protein kinase-like (PK-like) 626 925 IPR011009 -
Mtr4g3060 959 CDD PAN_AP_plant 54 133 - -
Mtr4g3060 959 Pfam S-locus glycoprotein domain 341 453 IPR000858 GO:0048544
Mtr4g3060 959 CDD B_lectin 188 283 IPR001480 -
Mtr4g3060 959 ProSiteProfiles Protein kinase domain profile. 643 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3060 959 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 185 957 - -
Mtr4g3060 959 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 37 168 - -
Mtr4g3060 959 SMART ntp_6 477 556 IPR003609 -
Mtr4g3060 959 SMART ntp_6 54 133 IPR003609 -
Mtr4g3060 959 Pfam D-mannose binding lectin 200 309 IPR001480 -
Mtr4g3060 959 Gene3D Phosphorylase Kinase; domain 1 602 718 - -
Mtr4g3060 959 Gene3D Hepatocyte Growth Factor 51 131 - -
Mtr4g3060 959 Gene3D Hepatocyte Growth Factor 474 554 - -
Mtr4g3060 959 ProSitePatterns Protein kinases ATP-binding region signature. 649 671 IPR017441 GO:0005524
Mtr4g3060 959 Gene3D Transferase(Phosphotransferase) domain 1 719 920 - -
Mtr4g3060 959 ProSiteProfiles Bulb-type lectin domain profile. 154 280 IPR001480 -
Mtr4g3060 959 Pfam Protein tyrosine and serine/threonine kinase 646 912 IPR001245 GO:0004672|GO:0006468
Mtr4g3060 959 ProSiteProfiles PAN/Apple domain profile. 53 134 IPR003609 -
Mtr4g3060 959 SMART blect_4 160 283 IPR001480 -
Mtr4g3060 959 CDD STKc_IRAK 649 914 - -
Mtr4g3060 959 ProSiteProfiles EGF-like domain profile. 417 455 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3060 Mtr-Chr4 44313174 44326382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3060 565 929 Receptor kinase-like Gene Family AT4G23190 51.220 3.39e-120 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g3060 PK_Tyr_Ser-Thr 3.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3060 - - mtr:MTR_4g091840 1334.7