Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3059 ATGAGCGAATCCCACCATCCCGCTACCAACACTAGCCAACCCATTGCCTCCGTCTCCAACCATCCCAGCGCCGCTGCCATTGTTTTTGATCACGATTGTGTCGATAAATTGGTGAACAACATTCATGAACAGAATGTGCAACACGGACAAGGAAGTATTGCCAACAATGTACCTCACTTGGAAATGAAGTTTGATTCTGAGTCGGCGGCTTATGAATTTTATAATGAGTACAGTAAAAGAATTGGATTTGGTATTCGTCGAGAATATGGAAATAAAACCAAAGTAGATGGAGTTTTGACTTCAAGAAGATTCACATGCTTCAAAGAGGGTGTACGAGGTGTTGACAAAAGACGTCAACCAAAAGGGGAGCCTAGAGCAGAAATTAGAACGGGATGTTTGGCGCGTATGGTTATTTCACTCGATCGGAAGATAGAGAAATATAAAGTTGTTGACTTTATAGCTGAACATAACCACGAACTTCAACATGAGCATGTTCATATGATTCGCTCTCATCGACGCATATCTGATACACAAGCATCACAAATTGTCTTGGGAGATGAATCTGGATTAAGACCAAAAGATTTGCATGAATATATAACCAAGCAAGCTGGTGGAATAAAGACAGTTGGTTTTACAAAAAAAGACCTTACGAATTACCTTGAAACCAAAAGGAAGCAGTCACCAAAGTATGGTGAGGTGGGTGCATTGATGATGTATTTCAAAAAAGAAAGTGAAAATCCCTCGTTCTATTATGACTTGCAAATGGATGTTGAAGAGCAAATAACAAATATATTTTGGGCGGATGCACAAATGATAAATGATTATGGGTATTTTGGTGATGTTATCACTTTTGACACCACATACAAGACAAATAAGGGTTATCGGCCGTTGGGAGTATTTGTTGGACTAAATAATCACAGGCAAACAATCATTTTTGGGGCAGCATTGTTATATGACGAAACAATCCCTTCTTTCAAGTGGTTATTTGAAACATTTCTCAAGGCAATGGGTGGTAAAAAGCCAAAAACCATGATGACGGATCAAGATGCCGCGATGGCTAAGGCTATTTCTTTAGTTATGCCAGAAACATTTCATGGATTGTGCACTTGGCATATAAGACAGAACGCTTTACGACATGTGAACCACTTGTATCAAAAGATTTCACGATTCGGTTTGGATTTTGAAGCATGCATAGATCTACATGAAGATGAGGGTGACTTTTTGAATGCTTGGAATTCTTTACTTGTTGAGCATAATATATTGGAAGGGTCGTGGTTGCATACAATTTTTCAATTGAAGGAGAAATGGGCATGGACATATGTCCGGAAAACATTCACTGCAGGTATGAGATCTACTCAATTAAGTGAGAGCTTTAATGCTGATTTTAAGAGTCATGGCCTTGCAACATGTTGCTAA 1416 0.3905 MSESHHPATNTSQPIASVSNHPSAAAIVFDHDCVDKLVNNIHEQNVQHGQGSIANNVPHLEMKFDSESAAYEFYNEYSKRIGFGIRREYGNKTKVDGVLTSRRFTCFKEGVRGVDKRRQPKGEPRAEIRTGCLARMVISLDRKIEKYKVVDFIAEHNHELQHEHVHMIRSHRRISDTQASQIVLGDESGLRPKDLHEYITKQAGGIKTVGFTKKDLTNYLETKRKQSPKYGEVGALMMYFKKESENPSFYYDLQMDVEEQITNIFWADAQMINDYGYFGDVITFDTTYKTNKGYRPLGVFVGLNNHRQTIIFGAALLYDETIPSFKWLFETFLKAMGGKKPKTMMTDQDAAMAKAISLVMPETFHGLCTWHIRQNALRHVNHLYQKISRFGLDFEACIDLHEDEGDFLNAWNSLLVEHNILEGSWLHTIFQLKEKWAWTYVRKTFTAGMRSTQLSESFNADFKSHGLATCC* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3059 471 Pfam FAR1 DNA-binding domain 72 161 IPR004330 -
Mtr4g3059 471 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 25 448 - -
Mtr4g3059 471 Pfam MULE transposase domain 281 375 IPR018289 -
Mtr4g3059 471 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 25 448 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3059 Mtr-Chr4 44308299 44310094 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr4g3059 MULE 7.8e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3059 - - cam:101500125 739.184