Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3058 ATGGACTCTGCTAAAAATATTTTCTACTTTGTCACAGCCAAAAATCATAAACACAAGTTAATAATACATAATAGTTGGTTCCTTATAAACTCTTTGATTCTACTCCTTCCGACCTTCTCCTTTTGCTCTTGTTCTACTGATATCATATCTACTGACAAACCAATAAGAGATGGTGAGCTTCTTGTTTCCAAATCCAAAACTTTTGCTCTTGGATTCTTCACTCCAGCAAAATCCACATCTCGCTATGTTGGTATTTGGTACAACAATTTGCCAATCCAAACTGTTGTTTGGGTTGCAAATAGAAATAGTCCAATCAACGATACTTCTGGAATTCTATCAATCGATCCAAATGAAAATCTAGTACTCAACCACAACCGTAGCACCATTCCCATTTGGTCTACCGATGTTTCATTACCACAATCACAAAGAAATAGCACCAGGGTTATAGCTCAATTATCGGATGTAGCAAACCTTGTTCTGATGATAAACAACACCAAAACTGTATTATGGGAAAGCTTTGATCATCCAACAGACACCTTGCTTCCATATCTAAAGATTGGGTTTAATAGAAAAACTAATCAAAGCTGGTTCCTTCAATCCTGGAAGACAGATGATGACCCTGGAAATGGTGCATTCACAGTGAAATTCAACAGCATTGTCAAACCTCAGTTGTTTATGTACAACCATGATTTTCCATGGTGGCGTGGTGGACATTGGAACGGAGCAATCTTAGTAGGTGCACCTAATATGAAACGAGATATGGCGATTTTGAATGTTTCTTTTGTGGAAGATGATGATAACTATGTAGCAATCTCATATAACATGTTTGATAAGTCTGTCATAGCTAGGATAGTTGTTCAGCAATCTGGTTTCTTTCAAATATTCACTTGGAACAATCAAAAAAGTCAATGGAACAGGTTCTGGTCTGAACCAACAAACCAATGTGATAACTATGGAACCTGTGGATCAAACAGTAACTGTGACCCTTTGAACTTTGAGGACTTTAAGTGTACTTGTCTACCAGGTTTTGAACCAAAATTTCCACGTGATTGGTATGAGAGAAGAGATGGGTCAGGAGGGTGTGTAAGGAAGAAAGGCGCATCTATTTGTCGGAATGGAGAAGGGTTTATCAAAGTTGCAAGCTTGAAAGTTCCTGATATATCTGTGGCAGTTACTAAAGGTGGTCTGAGTTTGGAAGAATGCGAGGAAGAATGCTTGAGAAACTGCTCTTGTACTTCCTATGCAGTTGCTGATGTGAGTAATGGTGGAAGTGGCTGTTTGGCATGGTATGGGGATTTAATGGACATTCAAAAACTTAGTGATCAAGGCCAAGATTTATTTGTACGTGTCGATGCAGTTGAACTAGCCAAAGCCAATAACCACAAAAGAAGCAAAGGAGTCCTAGGTCAAAAGAGGATTTCTGCAATTCTGGTTGCTTCTACAGTTGCGATTGTCCTCCTCCTCTCCTTTGTGTTTTGCAGGTGGAAGAAAACAAGAAACGATAAAATGATGCGGCAATTTAACCAAGATTCCTCTGAAGAAGAGAATGGTGCTCAAAGCAACACACATCCAAATCTTCCCTTTTTCAGCTTTAAAACGATTATAACAGCTACAAGAGATTTTAGTCATCAGAATAAGCTTGGACAAGGTGGATTTGGCTCTGTCTATAAGGGTTGCTTGGTTAATGGACAAGAGATAGCAGTGAAAAGATTGTCGAAAAATTCAGGTCAAGGAAAAGAAGAGTTTAAAACTGAAGTTAAACTTTTAGTTAAACTCCAACACAGAAATCTAGTGAGGTTGCTAGGTTGTTGCTTTGAAAAGGAAGAAAGGATGCTGGTTTATGAATACTTACCAAACAAAAGCCTAGATTTCTTTATATTTGATCAAAACCAAAGGTCATCATTGGATTGGGGAAAGCGTTTTGAAATTATTTGTGGGATTGCTCGAGGTGTTTTATATCTTCATCAAGATTCAAGGCTGAAAATAATTCATAGAGATCTAAAAGCCAGCAACGTTCTCCTCGATGCTGCAATGAATCCCAAAATCTCAGATTTTGGTATGGCTAGAATATTTGGAGAAGATGAAATACAAGCAAGAACAAAAAGAGTGGTTGGAACATATGGATATATGTCACCGGAATATGCAATGGAAGGACGATATTCAACTAAATCGGATGTCTTCAGTTTTGGTGTTTTACTACTGGAGATTATTGCCGGCCAAAGAAACACACATTGTGAAACAGGAAGAGACTCCCCAAATTTAATTGGACATGTGTGGACACTATGGACAGAAGGAAGAGCCTTGGATATAGTTGATCCAGAACTAAACCAGTTTTATCCCCCTTCTATAGTTATGAGATGCATTCAAATTGGACTTCTGTGTGTGCAAGAAAATGCAATTAATAGACCATCAATGTTAGAAGTTGTTTTCATGCTATGCAATGAAACACCTCTCTGCCCACCTCAAAAACCAGCATTTTTATTCAATGGCAACCAAGATTTGCAAGAATCATCAACATCAGGAGGAGGATCTTCAATAAATGAATTAACAGAAACTACCATCAGTGCTCGCTAA 2574 0.3815 MDSAKNIFYFVTAKNHKHKLIIHNSWFLINSLILLLPTFSFCSCSTDIISTDKPIRDGELLVSKSKTFALGFFTPAKSTSRYVGIWYNNLPIQTVVWVANRNSPINDTSGILSIDPNENLVLNHNRSTIPIWSTDVSLPQSQRNSTRVIAQLSDVANLVLMINNTKTVLWESFDHPTDTLLPYLKIGFNRKTNQSWFLQSWKTDDDPGNGAFTVKFNSIVKPQLFMYNHDFPWWRGGHWNGAILVGAPNMKRDMAILNVSFVEDDDNYVAISYNMFDKSVIARIVVQQSGFFQIFTWNNQKSQWNRFWSEPTNQCDNYGTCGSNSNCDPLNFEDFKCTCLPGFEPKFPRDWYERRDGSGGCVRKKGASICRNGEGFIKVASLKVPDISVAVTKGGLSLEECEEECLRNCSCTSYAVADVSNGGSGCLAWYGDLMDIQKLSDQGQDLFVRVDAVELAKANNHKRSKGVLGQKRISAILVASTVAIVLLLSFVFCRWKKTRNDKMMRQFNQDSSEEENGAQSNTHPNLPFFSFKTIITATRDFSHQNKLGQGGFGSVYKGCLVNGQEIAVKRLSKNSGQGKEEFKTEVKLLVKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDQNQRSSLDWGKRFEIICGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDEIQARTKRVVGTYGYMSPEYAMEGRYSTKSDVFSFGVLLLEIIAGQRNTHCETGRDSPNLIGHVWTLWTEGRALDIVDPELNQFYPPSIVMRCIQIGLLCVQENAINRPSMLEVVFMLCNETPLCPPQKPAFLFNGNQDLQESSTSGGGSSINELTETTISAR* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3058 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Mtr4g3058 857 ProSiteProfiles EGF-like domain profile. 311 349 IPR000742 -
Mtr4g3058 857 Gene3D Transferase(Phosphotransferase) domain 1 617 817 - -
Mtr4g3058 857 PANTHER - 33 854 - -
Mtr4g3058 857 PIRSF SRK 18 857 IPR024171 GO:0004674
Mtr4g3058 857 Coils Coil 855 857 - -
Mtr4g3058 857 SMART blect_4 52 176 IPR001480 -
Mtr4g3058 857 Gene3D Phosphorylase Kinase; domain 1 515 616 - -
Mtr4g3058 857 MobiDBLite consensus disorder prediction 835 857 - -
Mtr4g3058 857 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 207 IPR036426 -
Mtr4g3058 857 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 33 854 - -
Mtr4g3058 857 SMART serkin_6 541 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3058 857 ProSiteProfiles Bulb-type lectin domain profile. 46 173 IPR001480 -
Mtr4g3058 857 ProSitePatterns Protein kinases ATP-binding region signature. 547 569 IPR017441 GO:0005524
Mtr4g3058 857 SUPERFAMILY Protein kinase-like (PK-like) 522 823 IPR011009 -
Mtr4g3058 857 Pfam Protein tyrosine and serine/threonine kinase 543 809 IPR001245 GO:0004672|GO:0006468
Mtr4g3058 857 CDD STKc_IRAK 547 814 - -
Mtr4g3058 857 Pfam PAN-like domain 370 436 IPR003609 -
Mtr4g3058 857 ProSiteProfiles PAN/Apple domain profile. 370 451 IPR003609 -
Mtr4g3058 857 CDD PAN_AP_plant 371 450 - -
Mtr4g3058 857 SMART ntp_6 371 450 IPR003609 -
Mtr4g3058 857 Pfam S-locus glycoprotein domain 234 347 IPR000858 GO:0048544
Mtr4g3058 857 ProSiteProfiles Protein kinase domain profile. 541 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3058 857 CDD B_lectin 52 176 IPR001480 -
Mtr4g3058 857 Gene3D - 40 173 IPR036426 -
Mtr4g3058 857 Gene3D Hepatocyte Growth Factor 368 448 - -
Mtr4g3058 857 Pfam D-mannose binding lectin 94 202 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3058 Mtr-Chr4 44298399 44302912 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3058 484 835 Receptor kinase-like Gene Family AT3G45860 53.521 5.13e-123 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g3058 PK_Tyr_Ser-Thr 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3058 - - mtr:MTR_4g091840 1435.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3058 4 44298399 44302912 Mtr2g0276 2 2689203 2694762 PCT