Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3055 ATGAGAAGTTTCACCACATTCTTTCTCTTTTGTCTCTCCACTTCAATCACTTTCTTTTCAAAACCTTCAACTTCTGTTTCTAATACCTTAACAACATCTCAATTCCTTAGTATCAACCAAACCTTGTTCTCCCCAAAAGGAATTTTCCAACTCACTTTCTTTTCCTACAACAATTTTTCATGGTACTTAGGAATACGTTACAACATAGACCATGACAAAACAGTTGTTTGGGTTGCAAACAGAAACACCCCACTTCAAAATCCAACTGCTTTTCTCAAACTAACAAACACAGGAAACCTTATTATCATCAATGAATCCAACAAAACCATTTGGTCTTCAAATCAAACCAATCAAAATTCCACCTTAAACACAAATCCAATTCTTCAGCTTTTAGATTCTGGAAATTTGGTTGTAACAACAGAACCAAATGAAAATGATCCAACAAATTTTCTATGGCAAAGTTTTGATTACCCTACAGATACTTTGTTACCTGGTATGAAACTTGGTTGGAACTTCGACACGAACACAGAAACACACATAAATTCATGGAAACAAACAGATCAAGACCCTTCAATTGGTGATATATCTTTCAAGATGGATTATCATGGTGTTCCAGAAATTTTTCTTTGGAACAAAAATAGAAGAGTTTATAGAAGTGGACCATGGAATGGTAAAAGATTCAGTGGTGTACCAGAGATGCAACCAGTTACAGATTCAATTCAGTTCAGTTTTGTTGAGAATGAACATGAAGTTTACTATTCGTTTTCTATTGGGAAAGAATCATTGTTTTCAAGACTAAGTGTGAATTCATTAGGTGAACTTCAAAGGCTAACATGGATAAATAGTAGAAATATTTGGACAAAATTTTGGTATGCACCAAAAGACCAATGTGATAATTACAAAGAGTGTGGTCCATTTGGTGTGTGTGACACAAATGCTTCACCTGTTTGTAATTGTATTAAAGGGTTTCGACCAAAGAATCATCAAGCATGGAATTTGAGAGATGGATCTGATGGATGTTTGAGGAATAATGAGTTGGATTGTGAGAGTGATAAGTTTTTGCATATGGTGAATGTGAAGTTACCAGAGACAAGTAGTGTTTTTGTGAATAGGAGTATGAGTTTGGTTGAATGTGGTGATTTGTGTAAAAGGAATTGTTCTTGTACTGGTTATGCAAATATTGAGATTGTTGATGGTGGAATTGGTTGTGTTATGTGGCTTGATGAACTTATTGATATTAGAATTTATCCTGCTGGTGGTCAAGATCTCTTTGTCAGATTAGCAGCTTCTGATGTAGGTGATGATGGGGTAGGAGGAAGTTCTGATCACAAGATTGCTAGGGCTATAGGCATTATGGTTGGTGGTGCAACTATTATATTTTTGGTATTAGGAACATGTTACTTGTGGAGGAAGAAAAAATTGCAATGTCTATTGAAAGGGAAGAGGGAGAAAAGAGGTTCATTGGAAAGAAGTCAAGATTTGCTTATGACTGAGGGGGTGTATACAAGTAATAGAGAACAGACAAGTGAAAAGAACATGGATGACCTTGAATTGCCATTCTTTGATTTTAATACCATTACAATGGCTACTAACAATTTCTCTGAAGAAAATAAACTTGGACAAGGAGGCTTTGGTATTGTTTATAAAGGTAGGTTGATTGAAGGTCAGGAGATTGCAGTGAAGAGATTATCAAAAAATTCCGGTCAAGGCGTTGATGAATTCAAGAATGAGGTCAGGTTGATTGTCAAGCTTCAACATCGAAATCTTGTTCGGTTACTTGGTTGCAGCTTTCAGATGGATGAGAAGATGCTAGTGTATGAGTACATGGAAAATAGAAGCCTTGATGCCATTTTATTTGACAAAGCTAAAAGATTTTCGCTAGATTGGCAAACACGCTTCAACATTATAAGCGGAATAGCTAGAGGACTTCTGTATCTTCACCAAGATTCTAGATTTAGGATCATCCATAGAGATCTTAAGGCAAGCAACATTCTACTTGATGGAGAGATGAATCCAAAGATATCAGACTTCGGGATGGCAAGAATATTTGGCACGGATCAGACAGAGGCAAATACAGTTAGAGTTGTTGGAACATATGGCTATATGTCTCCAGAGTATGCTATGGATGGAATCTTCTCAGTGAAATCTGATGTTTTCAGTTTTGGTGTTCTTGTGATGGAAATCATAAGTGGAAAAAAGAACCGAGGTTTCTATTCTGCAAACAAAGAATTAAATCTTCTTGGTCATAGTTGGAAGTTGTGGAATGAAGGAAATGCTTTGGAGCTGATTGACTCTTCTATTGTTAATTCATATTCACCAGCTGAGGTTTTTAGATGCATACAAGTTGGGCTATTATGCGTACAAGAGCGAGCAGAAGATAGGCCAACAATGTCTTCAGTGGTGTTGATGTTGAGTAGTGAAACAGCAACAATAGCCCAGCCTAAAAACCCTGGGTTTTGCCTAGGAAGCAATCCTGTGGAAACTGATTCATCCTCAAGTAAACAAGATGAATCTTGCACTGTGAACCAAGTTACTGTCACAATGGTAGATGGTAGATAG 2559 0.3669 MRSFTTFFLFCLSTSITFFSKPSTSVSNTLTTSQFLSINQTLFSPKGIFQLTFFSYNNFSWYLGIRYNIDHDKTVVWVANRNTPLQNPTAFLKLTNTGNLIIINESNKTIWSSNQTNQNSTLNTNPILQLLDSGNLVVTTEPNENDPTNFLWQSFDYPTDTLLPGMKLGWNFDTNTETHINSWKQTDQDPSIGDISFKMDYHGVPEIFLWNKNRRVYRSGPWNGKRFSGVPEMQPVTDSIQFSFVENEHEVYYSFSIGKESLFSRLSVNSLGELQRLTWINSRNIWTKFWYAPKDQCDNYKECGPFGVCDTNASPVCNCIKGFRPKNHQAWNLRDGSDGCLRNNELDCESDKFLHMVNVKLPETSSVFVNRSMSLVECGDLCKRNCSCTGYANIEIVDGGIGCVMWLDELIDIRIYPAGGQDLFVRLAASDVGDDGVGGSSDHKIARAIGIMVGGATIIFLVLGTCYLWRKKKLQCLLKGKREKRGSLERSQDLLMTEGVYTSNREQTSEKNMDDLELPFFDFNTITMATNNFSEENKLGQGGFGIVYKGRLIEGQEIAVKRLSKNSGQGVDEFKNEVRLIVKLQHRNLVRLLGCSFQMDEKMLVYEYMENRSLDAILFDKAKRFSLDWQTRFNIISGIARGLLYLHQDSRFRIIHRDLKASNILLDGEMNPKISDFGMARIFGTDQTEANTVRVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVMEIISGKKNRGFYSANKELNLLGHSWKLWNEGNALELIDSSIVNSYSPAEVFRCIQVGLLCVQERAEDRPTMSSVVLMLSSETATIAQPKNPGFCLGSNPVETDSSSSKQDESCTVNQVTVTMVDGR* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3055 852 ProSiteProfiles PAN/Apple domain profile. 348 428 IPR003609 -
Mtr4g3055 852 SMART serkin_6 533 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3055 852 Pfam S-locus glycoprotein domain 217 327 IPR000858 GO:0048544
Mtr4g3055 852 Gene3D - 23 155 IPR036426 -
Mtr4g3055 852 Gene3D Transferase(Phosphotransferase) domain 1 609 816 - -
Mtr4g3055 852 SMART blect_4 33 158 IPR001480 -
Mtr4g3055 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Mtr4g3055 852 PIRSF SRK 1 852 IPR024171 GO:0004674
Mtr4g3055 852 CDD B_lectin 33 158 IPR001480 -
Mtr4g3055 852 Pfam PAN-like domain 348 413 IPR003609 -
Mtr4g3055 852 CDD STKc_IRAK 539 804 - -
Mtr4g3055 852 Pfam Protein tyrosine and serine/threonine kinase 536 802 IPR001245 GO:0004672|GO:0006468
Mtr4g3055 852 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 224 IPR036426 -
Mtr4g3055 852 SMART ntp_6 348 427 IPR003609 -
Mtr4g3055 852 PANTHER - 15 851 - -
Mtr4g3055 852 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 851 - -
Mtr4g3055 852 Gene3D Phosphorylase Kinase; domain 1 506 608 - -
Mtr4g3055 852 ProSiteProfiles Protein kinase domain profile. 533 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g3055 852 ProSiteProfiles Bulb-type lectin domain profile. 27 151 IPR001480 -
Mtr4g3055 852 Pfam Receptor serine/threonine kinase 489 523 IPR022126 GO:0004674
Mtr4g3055 852 SUPERFAMILY Protein kinase-like (PK-like) 512 804 IPR011009 -
Mtr4g3055 852 Pfam D-mannose binding lectin 74 184 IPR001480 -
Mtr4g3055 852 ProSitePatterns Protein kinases ATP-binding region signature. 539 561 IPR017441 GO:0005524
Mtr4g3055 852 Pfam Domain of unknown function (DUF3403) 806 852 IPR021820 GO:0004674
Mtr4g3055 852 CDD PAN_AP_plant 346 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3055 Mtr-Chr4 44286151 44293086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3055 521 847 Receptor kinase-like Gene Family AT4G11530 58.434 7.94e-133 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr4g3055 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3055 - - cam:101504189 1469.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0278 2 2705645 2709289 Mtr4g3055 4 44286151 44293086 PCT