Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3047 ATGGCGAGAAAATCCTCATCGGCGAACGAGGAGCTTCTACCGGACGAACTTCGGTGCGGGAGAACCGACGGGAAGCAATGGCGGTGCAAGAGGAGAGTGATGGATAATCTGAAACTGTGTGAGATTCATTATCTTCAAGGGAAGCATCGTCAATATAGAGAAAAGGTACCAGAGTCTTTGAAGCTTCAGAGAAAGCGTAAGAACAAGGAAGAAGAACAAGAACAAGAAACTGTTGTTGGTGTTGACAATGTGGAAGAAACAGTTAGGGTAGAAAAGGAGTTCAAAATGGAGCTGAGAAAAACTAAGAAGAAGAAAGTGAAGCTTGCAGAGAGTTCTGAATCGTTGACAGATTCACCTTCTGGTTCTGTTCCTGCGAGGAAGAAGACATTGAAGCAATGTGATACACAATTGGATCTTATAAGAATGGTTTTGGAGAGAGAAGTTGAGAAGAGGAAAAGAAACAATACCAATAAGAAGAAGAATAAGAAAAAGAAGATGAAGAAAAAGGTGATTAAAGAAGAAGTGGAATTGCATGATTTTAAAGAAGGTGAGTTGAGGAGAGAATTACCAAATGGAGTAATGGAGATATCACCGGCTTCGACGCCGGGTGATTATAAAAATGTGGGGACTCATTGTGATGTGAAAGTTGGTGATCATAAGATTGTAGCTGTAACGCCGCATTACTTCCGGTCGAAGAATATTGATAGGGTTGCTCTTGGAAAGTTGCAGGTTGTGCCTTATGGACCAAGCTTGAAGAAGGGGAACACTAAGAGGAAGTGTCACTCGTGTCAGAGAAGTGATTCTTTGAATCTTGTCCAGTGTTCGAGCTGTAACAAGGAGTTTTTCTGCTTTGATTGCATAAGAGATCGGTATCTTGACACTAGAAAAGAAGTTAAGAAGGCGTGCCCAGTTTGTCAACGAACTTGCACTTGTAAGGTCTGCTTGGCAGGTCAAAATAACGACAGTGAAAGTAAGGACAGTGAAAGTAAGGCCAATTTGTCTAGCAAAAGTAGAGTTGATAGAATACTCCATTTTCATTATTTGATCTGCATGCTCCTTCCGGTACTAAAGCGAATAAGTGAAAACCGAGAAACTGAGCTAGAAACAGAAGCAAAAATTAAAGGGAAAAGTATTTCTGATATTCAAATCAAGCAGGTTGAATTTGGTTACAGTGAAAATATTTACTGCAATCACTGCAAAACACCTGTCTTGGATCTCCATAGAACCTGTGATAGTTGTTCATATAGCCTATGCTTAAGATGCTGTGAGAAACTATGTCAAAGAACTTCTGGAGAAATTAACTCATCTTTCTTGAAGCTACGTGATCAAATGAAAGTTTGTGTGGACAGTGAGCACCGTATTTTGGATCAGAAGGACATTTGTTGTGGCAATTTAACTGCAACTTCAACATTGCCCCAGAGGACAAATTGTAATGATATTGAAAAAGCATCATGCCATCCTACGGAGGTTGGTGGATGTGGCACAGGCCTATTTGATTTAACTGCTTCAACATTGCCCGAGAGGACAAATTGTAATGATATTGAAAAAGCATCATGCCGTCCTACGGAGGTTGGTGGATGTGGCACAGGCCTATTTGATTTAACTGCTACTTCAACATTGCCCGAGAGGACAAATTGTAATGATAGCGAAAAAGTATCATGCCCTCCTACAGAGCTTGGTGGACGAGATACAGGTCTGCTTGATTTAACTACTTGTTCAACGTTGCCTGATATGACAAATTGTAATGATAGCAAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGGACGAGATACAGGTCTGCTTGATTTAACTACTACTTCAATGTTGCCCGAGATGACAAATTGTAATGATAGCAAAAAAGTATCATGCCCTCCTACGGAGCTTGATGGACGAGATACAGGTCTGCTTGATTTAACTGCTACTTCAACATTGCCCGAGATGACAAATTGTAATGATATTGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGGACGAGATACAGACCTGCTTGATTTAACTGCTACTTCAACATTGCCCGAGATGACAAATTGTAATGATATCAAAAAGGTATCATGCCCTCCTCTGGAGCTTGGTGGAAGAGATACAGACATGCTTGATTTAACTGCTACTTCAACGTCGCCCGAGAGGACAAATTGTAATGATATTGAAAAAGTATCATGCCCTCCTACGGAGCTTGGTGGATGTGGTACAGGCCTTCTTGATTTATTATGCATTTTTCCCTCGACTTTACTCAGAAAGATGGAAGTAAAAGCAGAAGAAATTGTTTGTAGCTATGACTTTCCTGAAACTTCGGATAAAAGTTCAAGCTGCTCACTGTGTTTTGACACCGACCTCAATACTGATCGATATAATCAGTTGCAGAAAGCAGCTGAGAGAGGAGATTCATCAGATAATTGCTTGTTTTGTCCTACAGTTTTGGACATCAGTGGTGATAACTTTGAGCACTTTCAGAAACATTGGGGAAAAGGCCAGCCTATAGTGGTCCAAGATGTGCTCCAAAGTACATCAAACCTCAGTTGGAATCCACTGTTCATGTTCTGTACTTATCTTGAGCAGAGCATTACAAAGTATGAGAATAATAAAGAGTTACTTGAATCCTGTTTGGATTGGTGTGAGGTGGAAATAAACATTAGGCAGTATTTTACCGGGTCTCTCAAATGTCGTCCTCAGAGAAACACTTGGCATGAGATGCTGAAACTGAATGGATGGCTGTCTTCACAAGTATTCAAAGAGCAGTTTCCAGCTCATTTTTCTGAAGTAATTGACGCTCTACCAGTTCAAGAATACATGAATCCTGTGTCTGGTCTTCTGAATTTAGCTGCAAATTTGCCAGACAGGAGTCCGAAACATGACATTGGGCCATATGTCTATATTTCGTATGGATGTGCTGACACAGAAGCTGATTCTGTGACAAAACTCTGTTGTGACTCATATGATGTGGTTAATATTATGACACATTCTGCGGATGTCCCTCTCTCTACAGAACAACTTACAAAAATAAGGAAATTGTTGAAGAAGCACAAAGCTCTGTGTCAAGTGGAGTCTGTTGAGCTGTTACCTGAACGGGAAGTGAAAGGGATGGCATTATCACATGCTGAAGAAACGGTACAAAAAGGTTTGCCGAGTATGGGGAAAGAAGGAATCGAGTTTTTCAGGAGAGTCGATAGAACATCCTGCATCTCCTCAACTGGAGCTAAAATAGCTTCTACTCAGAGCATATACAACAACATTTCCCAGGACGGAGAACACAATATCGTTTCTGATTCTGAACCCTCTCTTCATGGGACTGTTCCTACCACCAATTTGTCACCTAGAAGTCCCGCTGAAAGCTCTAGCTGTTATAAGAAAAAGTTCACTGAGCATTCAGGTGCCCAGTGGGATGTCTTTCGAAGACAAGATGTACCAAAGCTCGTAGAATACATTAAAAGACACTGCGATGAACTTACTAACACTCATGACTCTCACAAGAAGATGGTTCATCCAATTCTAGATCAGAGCATTTTTCTTGACCATATTCACAAAATGAGACTGAAGGAGGAGTTTAAGATTGAACCATGGACTTTCCAGCAACATGTTGGAGAAGCTGTCATCATTCCTGCTGGTTGTCCGTACCAGATAAGGAATTCTAAGTGTTGTGTCCATGCGGTATTGGAGTTTGTGTCCCCTGAAAATGTTGCCGAGTGTATCCAGTTGATTGACGAGGTCAGACGGTTACCTGAAGACCATAAAGCAAAAGTAGACAAGCTTGAGGTGAAGAAAATGGCGCTACATAGCATGAGTGCAGCAATTGACGAAATACGCCAGCTTACATGCAAAACATGA 3849 0.4121 MARKSSSANEELLPDELRCGRTDGKQWRCKRRVMDNLKLCEIHYLQGKHRQYREKVPESLKLQRKRKNKEEEQEQETVVGVDNVEETVRVEKEFKMELRKTKKKKVKLAESSESLTDSPSGSVPARKKTLKQCDTQLDLIRMVLEREVEKRKRNNTNKKKNKKKKMKKKVIKEEVELHDFKEGELRRELPNGVMEISPASTPGDYKNVGTHCDVKVGDHKIVAVTPHYFRSKNIDRVALGKLQVVPYGPSLKKGNTKRKCHSCQRSDSLNLVQCSSCNKEFFCFDCIRDRYLDTRKEVKKACPVCQRTCTCKVCLAGQNNDSESKDSESKANLSSKSRVDRILHFHYLICMLLPVLKRISENRETELETEAKIKGKSISDIQIKQVEFGYSENIYCNHCKTPVLDLHRTCDSCSYSLCLRCCEKLCQRTSGEINSSFLKLRDQMKVCVDSEHRILDQKDICCGNLTATSTLPQRTNCNDIEKASCHPTEVGGCGTGLFDLTASTLPERTNCNDIEKASCRPTEVGGCGTGLFDLTATSTLPERTNCNDSEKVSCPPTELGGRDTGLLDLTTCSTLPDMTNCNDSKKVSCPPTELGGRDTGLLDLTTTSMLPEMTNCNDSKKVSCPPTELDGRDTGLLDLTATSTLPEMTNCNDIEKVSCPPTELGGRDTDLLDLTATSTLPEMTNCNDIKKVSCPPLELGGRDTDMLDLTATSTSPERTNCNDIEKVSCPPTELGGCGTGLLDLLCIFPSTLLRKMEVKAEEIVCSYDFPETSDKSSSCSLCFDTDLNTDRYNQLQKAAERGDSSDNCLFCPTVLDISGDNFEHFQKHWGKGQPIVVQDVLQSTSNLSWNPLFMFCTYLEQSITKYENNKELLESCLDWCEVEINIRQYFTGSLKCRPQRNTWHEMLKLNGWLSSQVFKEQFPAHFSEVIDALPVQEYMNPVSGLLNLAANLPDRSPKHDIGPYVYISYGCADTEADSVTKLCCDSYDVVNIMTHSADVPLSTEQLTKIRKLLKKHKALCQVESVELLPEREVKGMALSHAEETVQKGLPSMGKEGIEFFRRVDRTSCISSTGAKIASTQSIYNNISQDGEHNIVSDSEPSLHGTVPTTNLSPRSPAESSSCYKKKFTEHSGAQWDVFRRQDVPKLVEYIKRHCDELTNTHDSHKKMVHPILDQSIFLDHIHKMRLKEEFKIEPWTFQQHVGEAVIIPAGCPYQIRNSKCCVHAVLEFVSPENVAECIQLIDEVRRLPEDHKAKVDKLEVKKMALHSMSAAIDEIRQLTCKT* 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3047 1282 Pfam WRC 14 55 IPR014977 -
Mtr4g3047 1282 ProSiteProfiles WRC domain profile. 13 59 IPR014977 -
Mtr4g3047 1282 PANTHER PROTEIN B160 9 501 - -
Mtr4g3047 1282 PANTHER PROTEIN B160 710 1281 - -
Mtr4g3047 1282 PANTHER PROTEIN B160 535 571 - -
Mtr4g3047 1282 MobiDBLite consensus disorder prediction 102 128 - -
Mtr4g3047 1282 Pfam JmjC domain, hydroxylase 1128 1223 IPR003347 -
Mtr4g3047 1282 SUPERFAMILY Clavaminate synthase-like 821 1274 - -
Mtr4g3047 1282 Gene3D Cupin 813 1254 - -
Mtr4g3047 1282 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 535 571 IPR045109 GO:0032454|GO:0033169
Mtr4g3047 1282 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 710 1281 IPR045109 GO:0032454|GO:0033169
Mtr4g3047 1282 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 9 501 IPR045109 GO:0032454|GO:0033169
Mtr4g3047 1282 MobiDBLite consensus disorder prediction 150 169 - -
Mtr4g3047 1282 ProSiteProfiles JmjC domain profile. 941 1245 IPR003347 -
Mtr4g3047 1282 SMART cupin_9 922 1245 IPR003347 -
Mtr4g3047 1282 ProSiteProfiles Zinc finger RING-type profile. 260 306 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3047 Mtr-Chr4 44203285 44210165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3047 8 50 GRF Transcription Factor Family AT4G37740 46.512 5.67e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mtr4g3047 JmjC 8.8e-10 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3047 K15601 - gmx:100810673 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3047 4 44203285 44210165 Mtr2g0296 2 2853395 2859372 PCT