Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3043 ATGACGTTGGGAAAGGAAATTGTTGAGAGACTCAATGACGTGAATGCCATGCTTTCTAAAGCTCCTAATATGCAGATTGCTATTGAGCAACCACCTAAACCTGTTGATGAGATGCCTTTTGGTGAAACTATAGGCTTGAACTTGATGTTCAACAAAGTATGGAAAAGTCTTGAAGATAATAATGTGGGAATAATTGGTTTATATGGAATGGGTGGCGTCGGAAAAACTACCCTTATGAAGAGAATTCACAGTGAATTAGGAAAGATGGAGCATAGTTTTGATATAGTGTTGTGGGCAGTGGTTTCTAAAGATTGTGATATCAATAAAATCATGACTGACATCAGAAATAGGTTAGGGATTGATGAGAACTTTTGGAAAGAAAGTAGTCAAGATCAAAGAGTAACCAAGATTCATGAACAGTTGAAAGGAAAGAAGTTTGTATTGATGTTAGATGATTTATGGGGAAAGCTAGAACTAGAAGCGATAGGAGTTCCGGTCCCCAAAGAATGTAACAACAAATCAAAAGTTGTTTTCACAACACGGTCCAAGGATGTATGTGCTAAAATGAAAGCTGAAACGAAATTGGAAGTGAAATGTCTATCTGATGAACAAGCGTTTGATTTGTTTCGTAAGAAAGTAGGTGATGAGACATTAAAATGTCACACAGAGATCCCAAATCTAGCGCATGAAATGGCTAAAGAATGCGGAGGATTGCCGCTAGCATTAATCACTGTGGGAAGTGCCATGGCAGGGGTGGAAAGTTATGATGCTTGGATGGATGCGAGAAATAATTTGATGAGTTCTCCTTCGAAAGCCTCAGATTTTGTAAAAGTTTTTCGAATCCTCAAGTTTAGCTATGACAAACTTCCAGATAATGCACATAAAAGTTGTTTCTTGTACTGTGCACTATACCCAGAAGATTTTGAATTAGATGGTGATGAACTTATTGATCGATGGATTGGTGAGGGATTTCTCCATGAAGATGGTAAAAGTATGTATGGTATGTACATCAAAGGGAAAACTATTATTGAAAAATTAATAGTTTCATGCCTATTAGAGGAGGGTATTGGTACTGGAATTAACATTGTGGCTGGTTGGAGGAGTAGGAGAATTAAGATGCATGATGTGATTAGAGACATGGCACTGTGGTTAGGTCGAGATGAAGATGAAAACAAAGACAAAATTGTAGTTCAAAGGGAAGCAATTTCCATGTCGGAAATGAATTTTGAAAGATTAAATGTTGTAAAGAGGATTTCAGTAATAACTAGGTTGGATTCAAAAGAAAGCTTGAAGGTACCAACTTGTCCAAATCTCATCACCCTTTGTTTAAGTTTAGAAATGGATTTAGGGATGGATTTGAATGCTCCTGTTTTATCATTAAATTTCCAATCCATAAAAAAGCTGAGAGTATTGGATTTATCAAGGGATCTTTGTATAAAGAACCTGTCCTCAGGAATAGGCGAGTTAGTGAACTTGGAATTCCTTAACCTCTCAGGATCAAAAGTATTTGAGTTGCCTATTGCATTGAAGAAGTTGAAAAAGTTGAGGGTACTCCTTATGGATGATATGTATTACTACGATTATGCTAAAATCATTCCTTTGGAAGTGATAGAAAGTCTTGAACAATTAAAGGTGTTTAGATTTAGTACACGTGATTTATGTTCCAGTCCAGTACAAAAAGAGATATCATTATTAGAGAAGCTGGAATCATTACCAAAATTGGAGGAACTGAGCCTGGAATTAAGAAACTTCACTAGTGTGCAGAGACTATTTCAATCCACCAAATTACGAGATTGCTCTAGATGCCTTGGGATTTCTTTTTCAAACAAGGAGGGGTCACAGTCACTTGAAATGTCTTCATTATTAAAATCCATGTCAAAAATGAGGCATTTGGACAGCATACGTCTTTGGGCTAGAAACAACCTCATGGATGGTTCATCGATTGCTGACAAATGCGATCTTGGAAATCTTCGCCGAGTGCACATAAGTAGTTGTCATTCAATAAATCATTTGACATGGTTGATGTATGCTCCGCTTCTTGAGATCCTTGTTGTTGGTCTTTGTGATTCAATTGAAGAGGTGGTGAAAGAAGGTAAAGATAACGAACAAGCTGGATCTGACTCCAAAAATGATATGATATTTGCAAATCTTACAGATCTTTGCCTTTATGGTATGCCAAAACTAGTGAGCATCCACAAGAGAGCTTTGGATTTTCCTTCCCTAAAACGTATTAAGGTAACTGATTGCCCCAATCTGAGGAAGCTTCCTTTCAATTCCAGGTTTGCTTTCAAGATTAACTTGATTGCAATCCAAGGTGAGACAGAGTGGTGGGACAATTTAGAGTGGGATGACACAATTATTCCAACCTTGCTACGTCCTAAACTTATAGAGAGTAGTAGTATTAAACTATTATTCAAGTGA 2421 0.3709 MTLGKEIVERLNDVNAMLSKAPNMQIAIEQPPKPVDEMPFGETIGLNLMFNKVWKSLEDNNVGIIGLYGMGGVGKTTLMKRIHSELGKMEHSFDIVLWAVVSKDCDINKIMTDIRNRLGIDENFWKESSQDQRVTKIHEQLKGKKFVLMLDDLWGKLELEAIGVPVPKECNNKSKVVFTTRSKDVCAKMKAETKLEVKCLSDEQAFDLFRKKVGDETLKCHTEIPNLAHEMAKECGGLPLALITVGSAMAGVESYDAWMDARNNLMSSPSKASDFVKVFRILKFSYDKLPDNAHKSCFLYCALYPEDFELDGDELIDRWIGEGFLHEDGKSMYGMYIKGKTIIEKLIVSCLLEEGIGTGINIVAGWRSRRIKMHDVIRDMALWLGRDEDENKDKIVVQREAISMSEMNFERLNVVKRISVITRLDSKESLKVPTCPNLITLCLSLEMDLGMDLNAPVLSLNFQSIKKLRVLDLSRDLCIKNLSSGIGELVNLEFLNLSGSKVFELPIALKKLKKLRVLLMDDMYYYDYAKIIPLEVIESLEQLKVFRFSTRDLCSSPVQKEISLLEKLESLPKLEELSLELRNFTSVQRLFQSTKLRDCSRCLGISFSNKEGSQSLEMSSLLKSMSKMRHLDSIRLWARNNLMDGSSIADKCDLGNLRRVHISSCHSINHLTWLMYAPLLEILVVGLCDSIEEVVKEGKDNEQAGSDSKNDMIFANLTDLCLYGMPKLVSIHKRALDFPSLKRIKVTDCPNLRKLPFNSRFAFKINLIAIQGETEWWDNLEWDDTIIPTLLRPKLIESSSIKLLFK* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3043 806 SUPERFAMILY L domain-like 372 765 - -
Mtr4g3043 806 PRINTS Disease resistance protein signature 64 79 - -
Mtr4g3043 806 PRINTS Disease resistance protein signature 140 154 - -
Mtr4g3043 806 PRINTS Disease resistance protein signature 235 249 - -
Mtr4g3043 806 PRINTS Disease resistance protein signature 463 479 - -
Mtr4g3043 806 CDD AAA 67 153 - -
Mtr4g3043 806 Pfam NB-ARC domain 49 287 IPR002182 GO:0043531
Mtr4g3043 806 PANTHER DISEASE RESISTANCE PROTEIN RP 52 739 IPR044974 GO:0006952
Mtr4g3043 806 Gene3D Ribonuclease Inhibitor 556 764 IPR032675 -
Mtr4g3043 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 301 IPR027417 -
Mtr4g3043 806 Gene3D Ribonuclease Inhibitor 386 555 IPR032675 -
Mtr4g3043 806 Gene3D - 286 382 IPR036388 -
Mtr4g3043 806 SMART AAA_5 61 202 IPR003593 -
Mtr4g3043 806 Gene3D - 199 285 IPR042197 -
Mtr4g3043 806 PANTHER DISEASE RESISTANCE PROTEIN RFL1-RELATED 52 739 - -
Mtr4g3043 806 Gene3D - 39 198 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3043 Mtr-Chr4 44170282 44174779 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3043 61 381 WRKY Transcription Factor Family AT5G45050 23.620 2.17e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3043 - K13459 mtr:MTR_4g091450 1539.24