Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3042 ATGGAAGCGTTGGGAATAATTTGGGAAGTTGCAAAAAGTTTGTTCAGTTGCACAAATGCACAAGCTGCCTATGTTTATAAGCTGCAGGAGAATCTGGAATCACTGAAAGAAAAATGGGATGATCTTCAAAACAAGGAAAAGGATGTGCAGACAGAAATTGATAGAGCTGAGAGCACAGGAGTGAAGAAAAGGACTAATGAAGGAATTGGTTGGCTTCAGGAATTTCAAAAGCTTCAAGAGAAAATGATGAAGGATATTCCAAATTTTCAAGAAGTTCAAAGTAACCGATGTCTAAATGGTTACTGCCCAAAAAACTTTGTGTCAAGCTACAAGTTGGGAAAGAAAATTGTTGAGAGTCTCAATGAGGTGAATGCCATGCTTTCTAAAGCTGATAAGACGCAGTTTGCTATTGAGCAACCACCTAAACTTGTTGCTGAGATTCCTTGTGGTGAGACTATAGGCTTGGACTTGATGGTCGACAAAATATGGCATAGTCTTGAAGATGATAATGTGGGAATAATTGGTCTATATGGAATGGGTGGGGCCGGAAAAACTACTCTTATGAAGAGAATTCAAAGTGAATTTGGAAAGAGAGAGCATTGTTTTGATCTTGTGTTGTGGGCAGTGGTTTCTAAAGATTGTGATATCAATAAAATCATGACTGACATCAGCAATAAATTAGGGATTGATGAGAGTTTTTGGAAAAGAAGTAGTGAAGACCAAAGAGTAGCGAAGATTCATGAACGGTTGAAAGGAAAGAAGTTTGTGTTGATGTTAGATGATTTATGGGGAAAGCTAGAACTACAGGCGATAGGAGTTCCGGTCCCGAAAGAAAGTAACAACAAATCAAAAGTTGTGTTCACAACACGGTTTGAGGATGTGTGTGCTAAAATGAAAACGGAAACAAAACTGGAAGTGAGATGTTTATATGATAAAGAAGCATTTGAATTGTTTTGTAACAAAGTAGGCGATGAGACATTAAAATGTCACACAGAGATCCCAAAGCTAGCGCATGAAATGGCTAAAGAATGCGGAGGATTGCCGCTAGCATTAATCACTGTGGGAAGTGCCATGGCAGGGGTGGAAAGTTATGATGCTTGGATGGATGCAAGAAATAATTTGAGGAGTTCTCCTTCTAAAGCCTCAGATTTTGTAAAAGTTTTTCGAATCCTCAAGTTTAGCTATGACAAACTTCCAGATAAGGCGCATAAAAGTTGCTTCTTGTACTGCGCACTATACCCAGAAGATTTTGAATTAGATGGTGATGAACTTATTGATCGATGGATCGGTGAGGGATTTCTCGATAAAGATGGTAAAAGTATACATGATATGTACAATCAAGGGAAATCTATTATTGAAAAATTAATACTTTCATGCCTATTAGAGGAGGGTATTGGTTCTGAATTAAACTTTTTGACTGGTTGGTATAAAAGGAAAATTAAGATGCATGATGTGATTAGAGATATGGCACTATGGTTAGCTCGAGATGAAGATGAAAACAAAGACAAAATTGTAGTTCAAGGGGAAGCAATTTCCATATCGGAAATGGATTCTAAAAGATTGAATGTTGTAGAGAGGATTTCAATAATAACTAGGGATACCAAGTTGTTGGAAGAAAGCTGGAAGATACCAACTTGTCCTAATCTCATCACCCTTTGTTTAAATTTAGGAGAGGGTCACCCTTTATCATTAAATTTCCAATCCATAAAAAGGCTGAGAGTGTTGGATTTATCAAGGAATCGTTGTATAATCAATCTGTCCTCAGAAATAGGAGAGTTAATCAACTCTGAATTCCTTAACCTCTCAGGATCAAAAGTACTTGAGTTGCCTATTGCATTGAAGAAGTTGAAAAAGTTGAGGGTATTTCTTATGGATGGCATGACTTGCACCAGCACCAGCAGTAACCCCATTCCTTTGGAAGTGATAGAAAGTCTTGAACAATTAAAGGTGTTTAGATTTAGTCGAGGTGATGACATTGAGAACACTGTACAAGAAGAGATATCATTACTAGAGAAGCTGGAATCCTTACCAAAATTGGAGGCACTGAGCATTGAATTAACTAGCATCACTAGTGTGCAGAGATTACTTCACTCCACCAAATTACGAGGTTGCACTAGACGCATTAGTATTTCTGGTTGGAAAAAGGAGGACAATAAGTCAGTTGAAATGTTTTCATTATTAACATCCATGTCAGAAATGAATCATTTGGAAAGCATATATCTTTCAAGCACAGACAGCCTTGTGGATGGTTCCTCGATTACTGACAAATGCCATCTTGGCATGCTTCGCCAAGTGTGCATAAATTTTTGTGGTTCAATAACTCATTTGACATGGTTGAGGTATGCTCCGCTTCTCGAGGTCCTTGTTGTGTCTGTTTGTGATTCAATCGAAGAGGTTGTGAAAGAAGCTAAAGATGACGAGCAAGCTGATAATATATTCACAAATCTTAAAATTCTTGGCCTTTTTTATATGCCAAAACTAGTGAGCATCCACAAGAGAGCTTTGGATTTTCCTTCCTTAAAACGTTTTGAGGTAGCTAAATGCCCCAATCTGAGGAAGCTTCCTTTGAATTCCAGCTTTGCTTTAAAGAATAACTTGATTGCAATCAAAGGAGAGACGGAGTGGTGGGACAAATTAGAGTGGGATGACACAATTATTCCAACCTTACTACGTCCTAAACTTCAATGGTGA 2691 0.3794 MEALGIIWEVAKSLFSCTNAQAAYVYKLQENLESLKEKWDDLQNKEKDVQTEIDRAESTGVKKRTNEGIGWLQEFQKLQEKMMKDIPNFQEVQSNRCLNGYCPKNFVSSYKLGKKIVESLNEVNAMLSKADKTQFAIEQPPKLVAEIPCGETIGLDLMVDKIWHSLEDDNVGIIGLYGMGGAGKTTLMKRIQSEFGKREHCFDLVLWAVVSKDCDINKIMTDISNKLGIDESFWKRSSEDQRVAKIHERLKGKKFVLMLDDLWGKLELQAIGVPVPKESNNKSKVVFTTRFEDVCAKMKTETKLEVRCLYDKEAFELFCNKVGDETLKCHTEIPKLAHEMAKECGGLPLALITVGSAMAGVESYDAWMDARNNLRSSPSKASDFVKVFRILKFSYDKLPDKAHKSCFLYCALYPEDFELDGDELIDRWIGEGFLDKDGKSIHDMYNQGKSIIEKLILSCLLEEGIGSELNFLTGWYKRKIKMHDVIRDMALWLARDEDENKDKIVVQGEAISISEMDSKRLNVVERISIITRDTKLLEESWKIPTCPNLITLCLNLGEGHPLSLNFQSIKRLRVLDLSRNRCIINLSSEIGELINSEFLNLSGSKVLELPIALKKLKKLRVFLMDGMTCTSTSSNPIPLEVIESLEQLKVFRFSRGDDIENTVQEEISLLEKLESLPKLEALSIELTSITSVQRLLHSTKLRGCTRRISISGWKKEDNKSVEMFSLLTSMSEMNHLESIYLSSTDSLVDGSSITDKCHLGMLRQVCINFCGSITHLTWLRYAPLLEVLVVSVCDSIEEVVKEAKDDEQADNIFTNLKILGLFYMPKLVSIHKRALDFPSLKRFEVAKCPNLRKLPLNSSFALKNNLIAIKGETEWWDKLEWDDTIIPTLLRPKLQW* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3042 896 SUPERFAMILY L domain-like 481 860 - -
Mtr4g3042 896 PANTHER DISEASE RESISTANCE PROTEIN RP 13 886 IPR044974 GO:0006952
Mtr4g3042 896 Coils Coil 25 59 - -
Mtr4g3042 896 Pfam NB-ARC domain 158 396 IPR002182 GO:0043531
Mtr4g3042 896 Gene3D - 143 307 IPR027417 -
Mtr4g3042 896 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 410 IPR027417 -
Mtr4g3042 896 PANTHER OS12G0491200 PROTEIN 13 886 - -
Mtr4g3042 896 Gene3D - 395 491 IPR036388 -
Mtr4g3042 896 PRINTS Disease resistance protein signature 173 188 - -
Mtr4g3042 896 PRINTS Disease resistance protein signature 249 263 - -
Mtr4g3042 896 PRINTS Disease resistance protein signature 344 358 - -
Mtr4g3042 896 PRINTS Disease resistance protein signature 567 583 - -
Mtr4g3042 896 Gene3D - 308 394 IPR042197 -
Mtr4g3042 896 Gene3D Ribonuclease Inhibitor 495 881 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3042 Mtr-Chr4 44145173 44157067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3042 170 413 WRKY Transcription Factor Family AT5G45050 25.000 6.30e-07 51.6