Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3040 ATGGGTGATGAAGAGTTAACCGGAGAATCTCAACTGGCCGGAGTACCCACCGGAGCTTGCCGACTCCGGCGAGCTTTGGAACTCATTTGTTCGTTACTTTCTCTAACGCTCTCGATCAGGGTCTTCGCCGGAAAATGGCAACTCATTCGGAACAAGCTTGAAGAGCTTCATTCAGGTTTAATCGCCGCCGAGAATAGTGATTCCGGCGAGAATCCGTCGCTTTCGAGGTTAGTAACTTCGATAGTAGCGACGGTGAAGGAGTGTCACGATCTGGGTCAGCGTTGCGTTGATTTCTCGTACAGTGGGAAGCTTTTGATGCAGAGTGATTTGGACGTAGCGTTTTCGAAACTCGATGGTTTAGCGAAGAAGCTTTCGGAGATTTATAGAACGGGGATTTTGACAAATGGGTTTGCGCTTGTTGTTTCAAAACCGTGTCTTGGTGCTTGTAAAGAGGATATGAGGTTCTATGTGAGAGATATTTTGACGAGGATGAAGATTGGTGAGTTGGGTATGAAGAAACAAGCTTTAAGGAATCTTCTTGAGGTTGTTGTTGAGGATGAAAAGTATGTTAAGGTTATTGTTGTTGATGTGAGTGATGTTGTTCATGTTCTTGTTGGGTTTTTGGGTTCTAATGAGGTGGAAATCCAAGAAGAGAGTGCTAAGGTTGTTTGTGTTCTTGCTGGTTTTGATTCATATAAAGGGGTTTTGATTAGTGCTGGTGTTATCGCGCCTTTGATCCGGGTTTTGGATTGTGGGAGTGAGTTGGGGAAAGTTGCGGCTGCGAGGTGTTTGATGAAATTGACGGAGAATTCGGATAATGCTTGGGCTGTTTCGGCTCATGGTGGTGTCACGGCGTTGTTGAATATTTGTGGGAATGATGATTGTAAAGGGGATTTGGTTGGTCCTGCTTGTGGTGTGTTGAGAAATCTTGTTGGTGTTGAGGAAGTTAAGAGATTCATGGTTGAGGAGGATGCGGTGTCGACTTTTATCAGGCTAGTGAAATCAAAGGAGGAAGCAATTCAGGTGAATTCAATAGGGTTCATTCAGAATATTGCCTTTGGAGATGAGTTGGTTAGGCAAATGGTGATTAGAGAAGGCGGAATCCGTGCTTTGTTACGTGTTTTAGATCCGAAATGGTCATATTCTTCAAAAACAAAGGAAATAACAATGAGGGCTATTGAAAGTTTGTGTTTTACTTCATCTAGCTCTGTAAGTATTTTAATGAGTTATGGTTTTGTGGATCAGTTGCTATATTATGTTCGACACGGTGAAGTTTCGATTCAAGAGTTAGCTTTGAAAGTGGCATTTAGATTATCTGGAACATCCGAAGAAGCTAAGAAAGCAATGGGAGATGCCGGTTTTATGGTAGAATTTGTTAAGTTTCTCAATGCGAAATCATTTGAAGTTCGCGAAATGGCAGCTGAAGCACTCTCCGGCATGGTCACGGTACCTAGAAATAGAAAGAGGTTTGTTCAAGATGATCATAACATAGCCCTGCTTCTGCAATTGCTTGATCCAGAAGAGGGAAATTCAGGTATTGGCTCTCGTGTGTTCATGTTGCGTGTATGCAACCAATGCTGTGTGAAAGCAGAATGGGAAACATGTGAATATTCAAATCAATTAGGCTGTTCTAGGGGAGATTTTTGCTAG 1650 0.4279 MGDEELTGESQLAGVPTGACRLRRALELICSLLSLTLSIRVFAGKWQLIRNKLEELHSGLIAAENSDSGENPSLSRLVTSIVATVKECHDLGQRCVDFSYSGKLLMQSDLDVAFSKLDGLAKKLSEIYRTGILTNGFALVVSKPCLGACKEDMRFYVRDILTRMKIGELGMKKQALRNLLEVVVEDEKYVKVIVVDVSDVVHVLVGFLGSNEVEIQEESAKVVCVLAGFDSYKGVLISAGVIAPLIRVLDCGSELGKVAAARCLMKLTENSDNAWAVSAHGGVTALLNICGNDDCKGDLVGPACGVLRNLVGVEEVKRFMVEEDAVSTFIRLVKSKEEAIQVNSIGFIQNIAFGDELVRQMVIREGGIRALLRVLDPKWSYSSKTKEITMRAIESLCFTSSSSVSILMSYGFVDQLLYYVRHGEVSIQELALKVAFRLSGTSEEAKKAMGDAGFMVEFVKFLNAKSFEVREMAAEALSGMVTVPRNRKRFVQDDHNIALLLQLLDPEEGNSGIGSRVFMLRVCNQCCVKAEWETCEYSNQLGCSRGDFC* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3040 549 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 18 517 - -
Mtr4g3040 549 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 281 325 IPR000225 GO:0005515
Mtr4g3040 549 SMART arm_5 313 353 IPR000225 GO:0005515
Mtr4g3040 549 SMART arm_5 270 312 IPR000225 GO:0005515
Mtr4g3040 549 SMART arm_5 186 228 IPR000225 GO:0005515
Mtr4g3040 549 SMART arm_5 229 269 IPR000225 GO:0005515
Mtr4g3040 549 SMART arm_5 442 482 IPR000225 GO:0005515
Mtr4g3040 549 SMART arm_5 355 398 IPR000225 GO:0005515
Mtr4g3040 549 Gene3D - 157 527 IPR011989 -
Mtr4g3040 549 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 18 517 - -
Mtr4g3040 549 SUPERFAMILY ARM repeat 162 510 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3040 204 434 U-box Gene Family AT3G54790 24.893 8.96e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3040 - - gmx:100809382 765.763