Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3010 ATGGACAGCACAGATTCATCATCTTGCTCTCCACACCCCCACCTACCACCAGGTTTCCGATTCCACCCTACCGATGAAGAACTCGTTGTTCACTACCTCAAAAGAAAAGCTGCTTCTGCACCTCTTCCAGTAGCCATCATAGCAGAGATTGATCTCTACAAATTCGACCCATGGGAACTCCCAAGTAAAGCAAGTTTTGGGGAACAAGAATGGTATTTTTTCAGCCCAAGGGATAGAAAATACCCAAATGGGGCCAGGCCTAATAGGGCTGCAACTTCTGGGTATTGGAAAGCTACTGGAACTGATAAGCCTATATTAACATCTGATGGGAATCAGAAAGTTGGAGTTAAGAAAGCACTTGTTTTTTATGGAGGGAAGCCACCAAAAGGAGTGAAAACTAATTGGATTATGCATGAGTACAGGCTCATCACTGATCACAATAATCATCATTCTTATAATGCAACTTCAAAAACTCCTCCTCTGCCTTCTGATCATCCTCCAAATAATAACAAGAAGAATTCCCTAAGGCTTGATGATTGGGTTTTGTGCCGAATATACAAGAAAAGCAACAGTAGCAACATGCCAAGGCCACTCCTAATGGATCAATATGATGATCAAACCTATAATATGCAACAAAACTCCAAACATTCATCTTCAAGAAGCACAAGTTATGGACTTGAAAATGATGACAATTTCTTTGATGGAATCTTAGCATCTGATCACGGAATGCAAAATGGTTGTGACATAAACTCAAAGGGTGATAACAATAATAATGAATCATTATTCCCTATGAAACGTGCACTAAATGCATCATCACAGTTTTGGAATGAAACAGGGTCACCAGGGTCATCTTCTTCAAGCAAACGGTTTCATGGAGATCTTAACAGTGGAATTAGCAGCAATGCTGAGGAAAATAATTCATTTGTTTCACTGCTTAGCCAGCTTCCACCAAGCACAACTTTTCATCAAAATTCAATTCTTGGAGATGGTGTAATGAGGCAACAATTTCAACTTCCGGACATAAATTGGAACTAG 1035 0.4 MDSTDSSSCSPHPHLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEIDLYKFDPWELPSKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSDGNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLITDHNNHHSYNATSKTPPLPSDHPPNNNKKNSLRLDDWVLCRIYKKSNSSNMPRPLLMDQYDDQTYNMQQNSKHSSSRSTSYGLENDDNFFDGILASDHGMQNGCDINSKGDNNNNESLFPMKRALNASSQFWNETGSPGSSSSSKRFHGDLNSGISSNAEENNSFVSLLSQLPPSTTFHQNSILGDGVMRQQFQLPDINWN* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3010 344 MobiDBLite consensus disorder prediction 149 174 - -
Mtr4g3010 344 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 320 - -
Mtr4g3010 344 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Mtr4g3010 344 MobiDBLite consensus disorder prediction 1 20 - -
Mtr4g3010 344 SUPERFAMILY NAC domain 10 188 IPR036093 GO:0003677|GO:0006355
Mtr4g3010 344 PANTHER NAC TRANSCRIPTION FACTOR 56 1 320 - -
Mtr4g3010 344 Gene3D NAC domain 24 193 IPR036093 GO:0003677|GO:0006355
Mtr4g3010 344 ProSiteProfiles NAC domain profile. 15 188 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3010 Mtr-Chr4 43710942 43712948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3010 1 344 NAC Transcription Factor Family AT1G61110 54.144 3.16e-112 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr4g3010 NAM 6.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3010 - - gmx:100797132 479.174