Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3007 ATGGCTTACAGACGTTGCCTCTTACAGAGAGGCAAACTCATAGATCGAAGGTCCCATCCTTCTTTCACCTATCTTCTCCACACCGACGATGAAACCAAACCAGATGAAAAACGATCTTCAACAGGATTCAGTAACAATTCCACCCAATCAAGATCCTTTCGAACCTCTCTTAACGGAGGATCAATCGGTTTTTTCTCATCTTCTCAACACAAACACCTTTCACCGTTCGCTGGATATAATTACTGCCGAAATATGTCAATAATGGATCAGAGTTCTGATAAGATTACCGTAATCACTGATGTAGCTGATGTGACTTCTCAGGCCGCTACCGGTGTTAGCGAAGTTGCCATCGCTGCTGCTGATTCTTATTTGCCTGTTCAAGCCTTGCAGTATGTCATTGATGCTGTTCATTTATACACTGGCCTTGACTGGTGGGCGGCCATAGCTCTAACAACTCTCGTGATTCGAACTGCAACTGTTCCACTCTTAGTAAATCAACTCAAGGCCACTTCTAAGCTTACGCTTATGAGGCCTCGCTTGGAACAGATAAAGGAAGAGATGGACGGGAAGACATCTGATCCCGCGGCTGTTGCTCAAGGTCAGGAGAGGATGAGTAAGCTATTCAAAGAATATGGTGTGACTCCTTTTACGCCATTGAAGGGACTCTTTATTCAAGGTCCTGTCTTCATTAGTTTCTTTCTTGCGATAACAAACATGGCTGAAAAAATGCCATCATTCAAGCACGGTGGAGCTTTCTGGTTTACTGATCTCACAACTCCTGATGCCTTGTACATTTTTCCAGTTTTGACTGCTTTGTCATTCTTAATAGTAGTAGAGACTAATATGCAAGAAGGTATGGAAGGAAATCCTATGGGTAACACCATGAAAAAATTCTCGAGGGTTCTTGCTCTTCTTTCAGTTCCTTTCACTCTGAGTTTTCCAAAGGCAATTTTTTGTTACTGGATTACATCAAATTTGTTTTCATTGACGTATGGAATGGTGCTTAGAACTCCTGGTGTAAAGAAAACTTTGGGTATTCCTGATTTACCTCCTGCAGAACCCACCAGTTCTCGGCAATCTCCCTTCTCTATATTTCCAGCACTAAAACAACGAAAAGATCAAAGCTCGTTGCCAATTGAATCACCAAAACAAATAAAAAATCAAAGCTCATTGCCAGTTGAAACACCAAAACAACCAAACAAAAAGATATCTTCTATTAGTCAAAGGATTAGAAGCTTAGAAAAACATGTTAAAGGAAGAAAGATAAGCAAGAAATGA 1278 0.41 MAYRRCLLQRGKLIDRRSHPSFTYLLHTDDETKPDEKRSSTGFSNNSTQSRSFRTSLNGGSIGFFSSSQHKHLSPFAGYNYCRNMSIMDQSSDKITVITDVADVTSQAATGVSEVAIAAADSYLPVQALQYVIDAVHLYTGLDWWAAIALTTLVIRTATVPLLVNQLKATSKLTLMRPRLEQIKEEMDGKTSDPAAVAQGQERMSKLFKEYGVTPFTPLKGLFIQGPVFISFFLAITNMAEKMPSFKHGGAFWFTDLTTPDALYIFPVLTALSFLIVVETNMQEGMEGNPMGNTMKKFSRVLALLSVPFTLSFPKAIFCYWITSNLFSLTYGMVLRTPGVKKTLGIPDLPPAEPTSSRQSPFSIFPALKQRKDQSSLPIESPKQIKNQSSLPVETPKQPNKKISSISQRIRSLEKHVKGRKISKK* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3007 425 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 144 333 IPR028055 -
Mtr4g3007 425 PANTHER OXA1 77 390 IPR001708 GO:0016021|GO:0032977
Mtr4g3007 425 MobiDBLite consensus disorder prediction 374 407 - -
Mtr4g3007 425 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 77 390 - -
Mtr4g3007 425 MobiDBLite consensus disorder prediction 370 425 - -
Mtr4g3007 425 Pfam 60Kd inner membrane protein 144 334 IPR001708 GO:0016021|GO:0032977
Mtr4g3007 425 MobiDBLite consensus disorder prediction 25 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3007 Mtr-Chr4 43672006 43679292 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g3007 44 342 Chloroplast and Mitochondria Gene Families AT2G28800 24.534 3.06e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3007 K03217 - gmx:100817052 557.37