Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2996 ATGTCCACCATTCTGCCAAGTTCTCTTTCACATGAAATCTTCTCTTCATTCCGTATGCTTTTCTTCACTATCTTTCCACTATTCCTCATTTCTCTTTTTGTAATCATAAAATATTGGCATAATTCCAACAATTCTTCTACCACCAAAAAAAACTTACCTCCTTCACCTCCAAGAATTCCTCTACTTGGTAACCTCCATCAATTTGGTTTGTTTCCTTACCGCACACTCCACACTTTATCTCACAAATATGGCCCTTTAATGCTTCTTTATTTTGGGAAGGTTCCAGTACTTGTAATTTCCTCTGCTGATACAGCAAGAAAAGTAATGAAAACTCATGATTTGGTTTTCTCTGATAGACCATATCGTAAAATGAATGACATACTTTTATATGGTTCCAAAGATATGGCTAGTTGTGGATATGGTGAATATTGGAGGCAATTAAGGAGTCTAAGTTTGTTACACATCTTAAGTAACAGAAGAGTTCAATCTTATCGTCGTGTGAGAGAGGAAGAAACATTACGAATGATGAAACATATTAAGGAGTGTTCTTCTGCATCGCCGTTGAATTTAAGTGAGTTGTGTGCTACAATTACTAATGATATAGCATGCAGGGTGGCACTTGGAAAAACATACCGTGAAGGAAAAGGTAAGAGATTTCACAAGTGGTTGTTGGAGTTTGGAGAGTTATTAGGTACTGTATGTATAGGAGATTATATACCATGGCTTGATTGGTTGGGAAAAGTAAATGGTCTTTATGGCAAGGCAGAAAAATGTGCAAAAATTTTGGATGATTTTATAGAACAAGTAATTGAGGACCACATTAGTCGTAGATCTGATGGAGATGTTGAGAATGAGGAGCATAATGATTTTGTGGATGTTTTACTTTCTGTTCAAAAGACTGATGCTATTGGCTTTTCCATTGATAAAACTGCAATCAAGGCTTTGATACTGGACATGTTTGCCGCAGGTACTGATACTACCTACACAGTTCTAGAATGGGCAATGACAGAATTATTAAGACACCAAACTGTGATGCATAAATTGCAAGATGAGGTGAGAACTGTGGTTGGCAACAAAACTCATGTAACTGAAGATGATTTGGTTAATATGAACTACTTGAAAGCTGTGATCAAAGAAACTCTTCGCCTCCATGCACCAGTTCCGTTATTAGTCCCTCGAAAATCAATGGAAGATATCAAACTAAATGGCTATGACATTGCAGCTGGTACACAGGTAATAGTCAATGCTTGGGCAATTGCAAGAGATCCTTCAAGTTGGGATCAACCTCTAGAGTTTAAACCAGAAAGGTTTATGAACAGTTCAATAGATTATAAAGGATTGGATTTTGAACTTATTCCATTTGGAGCAGGAAGGAGAGGTTGTCCTGGAGTGTTGTTTGCTATTGCTGTCAATGAATTGGTGCTAGCAAACCTTGTTCACCATTTTGATTGGAAATTGCCTGATGGAGTTGCAGTGAAAGATTTGGACATGTCTGAAACTGTCGGCATTACATGTCATAGAAAATATCCCCTCCTTGCAGTAGCTACCAAATATGATAAAAATGAATGA 1569 0.3728 MSTILPSSLSHEIFSSFRMLFFTIFPLFLISLFVIIKYWHNSNNSSTTKKNLPPSPPRIPLLGNLHQFGLFPYRTLHTLSHKYGPLMLLYFGKVPVLVISSADTARKVMKTHDLVFSDRPYRKMNDILLYGSKDMASCGYGEYWRQLRSLSLLHILSNRRVQSYRRVREEETLRMMKHIKECSSASPLNLSELCATITNDIACRVALGKTYREGKGKRFHKWLLEFGELLGTVCIGDYIPWLDWLGKVNGLYGKAEKCAKILDDFIEQVIEDHISRRSDGDVENEEHNDFVDVLLSVQKTDAIGFSIDKTAIKALILDMFAAGTDTTYTVLEWAMTELLRHQTVMHKLQDEVRTVVGNKTHVTEDDLVNMNYLKAVIKETLRLHAPVPLLVPRKSMEDIKLNGYDIAAGTQVIVNAWAIARDPSSWDQPLEFKPERFMNSSIDYKGLDFELIPFGAGRRGCPGVLFAIAVNELVLANLVHHFDWKLPDGVAVKDLDMSETVGITCHRKYPLLAVATKYDKNE* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2996 522 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2996 522 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2996 522 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2996 522 PANTHER CYTOCHROME P450 71B11-RELATED 22 519 - -
Mtr4g2996 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Mtr4g2996 522 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2996 522 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2996 522 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2996 522 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2996 522 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2996 522 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2996 522 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2996 522 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2996 522 Gene3D Cytochrome P450 37 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2996 522 Pfam Cytochrome P450 53 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2996 522 SUPERFAMILY Cytochrome P450 53 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2996 522 PANTHER CYTOCHROME P450 FAMILY PROTEIN 22 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2996 Mtr-Chr4 43589076 43593827 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2996 49 516 Cytochrome P450 AT3G48270 50.746 1.66e-179 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2996 - - gmx:100819183 728.783