Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2962 ATGGCAATAGCAATTAGGCACTTTTCATCGATGAGATTGAGTGATAAGTCGAAGAACCGAAAGGTTACTGCGATTGAAACATCTGAGGATAAATGGAATATTGACCTCTCTAAGCTCTTTGTTGGTCCTAGGTTTGCTCATGGAGCTCATAGTAGGCTTTACCATGGTTTGTATGAAGACGAACCTGTTGCCGTCAAAAATATCAAGGTACCAGATGACGATGAACACGGAACAATAGCTGCTACATTAGACAAACAATTCTTCACGGAAGTCACGCTTTTATCTCGCCTCCACCATCCAAATGTTCTTAAGTTGGTAGCAGCATGCAGAAACCCACCTGTTTATTGTGTTATCACAGAGTATCTATCGGAAGGTTCGTTGAGGAGTTATTTGCACAAGTTGGAGGGAAAAACGATTTCTCTACAGAAACTAATTGCTTTTTCTTTGGATATTGCTCGTGGAATGGAATATATACACTCTCAAGGCGTCGTTCATCGAGACCTTAAACCAGAGAATGTCCTTATTAATGATGACTTTCACCTTAAAATTGCTGATTTTGGCATTGCTTGTGAGGAAGCACACTGCGAGTTACTTGCTGACGACCTTGGTACCTACCGTTGGATGGCACCTGAGATGATCAAGAGAAAATCCTATGGGAGAAAGGTTGATGTCTATAGTTTTGGGCTTATGTTATGGGAGATGCTTACCGGTAGAATACCATTCGAGGATATGACTCCCGTCCAGGCTGCTTTTGCTGTCCTAAATAAGAATTCAAGGCCTGTTATTCCTTCAAACTGCCCACCAGCTATGCGAGCTTTAATGGAGCAATGTTGGTCCTTGAATCCGGACAAAAGGCCTGAGTTCTGGCAGGTTGTTAAGGTGTTAGAACAATTTGAATCTTCGCTTGCTCGCGATGGAACGTTGACCCCGCTACAAAATCCTTGTGGACTTGATCATAAAAAAGGGCTTCTTCATTGGATTCACAAGCATAGTCCTACACATCAACATCATAGTAGTGGTTTTGTGGCTAAACCAAAATTTACATGTATATTCTGA 1056 0.4186 MAIAIRHFSSMRLSDKSKNRKVTAIETSEDKWNIDLSKLFVGPRFAHGAHSRLYHGLYEDEPVAVKNIKVPDDDEHGTIAATLDKQFFTEVTLLSRLHHPNVLKLVAACRNPPVYCVITEYLSEGSLRSYLHKLEGKTISLQKLIAFSLDIARGMEYIHSQGVVHRDLKPENVLINDDFHLKIADFGIACEEAHCELLADDLGTYRWMAPEMIKRKSYGRKVDVYSFGLMLWEMLTGRIPFEDMTPVQAAFAVLNKNSRPVIPSNCPPAMRALMEQCWSLNPDKRPEFWQVVKVLEQFESSLARDGTLTPLQNPCGLDHKKGLLHWIHKHSPTHQHHSSGFVAKPKFTCIF* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2962 351 PIRSF ILK 8 311 - -
Mtr4g2962 351 ProSiteProfiles Protein kinase domain profile. 39 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2962 351 SUPERFAMILY Protein kinase-like (PK-like) 21 295 IPR011009 -
Mtr4g2962 351 SMART serkin_6 39 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2962 351 PANTHER TYROSINE KINASE FAMILY PROTEIN 4 323 - -
Mtr4g2962 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Mtr4g2962 351 PRINTS Tyrosine kinase catalytic domain signature 119 132 IPR001245 GO:0004672|GO:0006468
Mtr4g2962 351 PRINTS Tyrosine kinase catalytic domain signature 157 175 IPR001245 GO:0004672|GO:0006468
Mtr4g2962 351 PRINTS Tyrosine kinase catalytic domain signature 203 213 IPR001245 GO:0004672|GO:0006468
Mtr4g2962 351 PRINTS Tyrosine kinase catalytic domain signature 222 244 IPR001245 GO:0004672|GO:0006468
Mtr4g2962 351 PRINTS Tyrosine kinase catalytic domain signature 266 288 IPR001245 GO:0004672|GO:0006468
Mtr4g2962 351 Pfam Protein tyrosine and serine/threonine kinase 46 295 IPR001245 GO:0004672|GO:0006468
Mtr4g2962 351 Gene3D Transferase(Phosphotransferase) domain 1 124 316 - -
Mtr4g2962 351 CDD STKc_MAP3K-like 46 295 - -
Mtr4g2962 351 Gene3D Phosphorylase Kinase; domain 1 27 123 - -
Mtr4g2962 351 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 4 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2962 Mtr-Chr4 43303973 43305509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2962 5 334 MAP Kinase Kinase Kinase AT5G58950 62.209 2.29e-160 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mtr4g2962 PK_Tyr_Ser-Thr 2.9e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2962 - - mtr:MTR_4g088745 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2962 4 43303973 43305509 Mtr2g0383 2 3836050 3840436 PCT