Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2961 ATGGATGAAACTAGTAATTCTTGGTTAAGAAGGACAAAATTCTCTCACACGGTTTGTCACCGATTGGATTATTCGAGAATAGGCTCTTTCATTATTCAGCAAGATGCAGTGCCGAATTCCGGTCTGAAATCAAGGACACCATCGTTAGTTTCATCAGCTTCAGTAACAGCAGCATCGGCACCAGCTTCGGCAACAGCAACAGCAACAGCAGCATCTGCACCTCCTGTTGTTTCTAAGGTTTCAAAGGTTCAGAAACATCCTTTAACAAATAAGCAGAGATCTTTGTCTCCTTTGCCTGAAACCTCTCTCTCTCAAACCTTTAAGGAAGCCAAGCATGAACAGAAGAGGTTCTCGACTCCTGGTCCAAGAAGGAAAGAGCAGGATACAAGAATCATGGGGAAACTACTGAACAAGGACTCTCAAGTTTCCAAATCTAAATCGCCCCAAAAAAGTCCAATTAGGCACTTTTCATCGATAAGATTCAGTGACAAGTTGAAGAACCGAAAGGACTCGGGATGGACAAAGTATTTTGATCATGGTGGAGGAAAGGTTACCGCAGTCGAAACGGCTGAGGAATGGAATGTTGACCTCTCTAAGCTCTTTGTTGGTCTTAGGTTTGCTTATGGGGCTCACAGTAGGCTTTACCATGGTATGTATGAGGAGGAACCTGTTGCTGTGAAAATAATCAGGGTACCGGATGATGACGAAAACGGAACAATGGCTGCTACATTAGAGAAACAATTCATCACAGAAGTCACACTTTTATCTCGCCTCCACCATCAAAATGTTCTTAAGTTCGTAGCAGCATGCAGAAAGCCACCTGTTTACTGTGTTATCACAGAATATCTATTAGAAGGTTCATTGAGGGCATATTTGCATAAGTTGGAGGGGAAAATCATTTCTTTACAGAAGCTAATTGCTTTTTCTCTGGATATTGCTCGTGGAATGGAATATATACACTCTCAAGGTGTCATTCATCGAGACCTTAAACCAGAGAATGTTCTCATTAATGGGGACTCTCATCTTAAAATTGCTGATTTTGGCATTGCCTGTGAGGAAGCATACTGCGACTTACTTGCTGATGACCCTGGTACTTACCGTTGGATGGCACCTGAAATGATCAGACGAAAGTCCTATGGGAGAAAGGTTGATGTCTATAGTTTTGGGCTTATCTTATGGGAAATGCTCACCGGTACAATACCATATGAGGATATGACTCCCATCCAGGCTGCGTTTGCTGTCGTAAATAAGTTTGTAGCAGCATGCAGAAAAGCATATGTTTATTGTGTTATCACAGAGTATCTATCGGAAGGTTCGTTGAGGGCATATATATATTTGCACAAGTTGGATATTCTATTAGCGGGTCTCAAGCCTAGATGA 1380 0.421 MDETSNSWLRRTKFSHTVCHRLDYSRIGSFIIQQDAVPNSGLKSRTPSLVSSASVTAASAPASATATATAASAPPVVSKVSKVQKHPLTNKQRSLSPLPETSLSQTFKEAKHEQKRFSTPGPRRKEQDTRIMGKLLNKDSQVSKSKSPQKSPIRHFSSIRFSDKLKNRKDSGWTKYFDHGGGKVTAVETAEEWNVDLSKLFVGLRFAYGAHSRLYHGMYEEEPVAVKIIRVPDDDENGTMAATLEKQFITEVTLLSRLHHQNVLKFVAACRKPPVYCVITEYLLEGSLRAYLHKLEGKIISLQKLIAFSLDIARGMEYIHSQGVIHRDLKPENVLINGDSHLKIADFGIACEEAYCDLLADDPGTYRWMAPEMIRRKSYGRKVDVYSFGLILWEMLTGTIPYEDMTPIQAAFAVVNKFVAACRKAYVYCVITEYLSEGSLRAYIYLHKLDILLAGLKPR* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2961 459 MobiDBLite consensus disorder prediction 134 156 - -
Mtr4g2961 459 Gene3D Transferase(Phosphotransferase) domain 1 284 431 - -
Mtr4g2961 459 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 415 449 - -
Mtr4g2961 459 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 417 - -
Mtr4g2961 459 MobiDBLite consensus disorder prediction 83 105 - -
Mtr4g2961 459 MobiDBLite consensus disorder prediction 106 133 - -
Mtr4g2961 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 324 336 IPR008271 GO:0004672|GO:0006468
Mtr4g2961 459 PRINTS Tyrosine kinase catalytic domain signature 280 293 IPR001245 GO:0004672|GO:0006468
Mtr4g2961 459 PRINTS Tyrosine kinase catalytic domain signature 318 336 IPR001245 GO:0004672|GO:0006468
Mtr4g2961 459 PRINTS Tyrosine kinase catalytic domain signature 364 374 IPR001245 GO:0004672|GO:0006468
Mtr4g2961 459 PRINTS Tyrosine kinase catalytic domain signature 383 405 IPR001245 GO:0004672|GO:0006468
Mtr4g2961 459 MobiDBLite consensus disorder prediction 81 158 - -
Mtr4g2961 459 SMART serkin_6 200 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2961 459 CDD STKc_MAP3K-like 209 417 - -
Mtr4g2961 459 Gene3D Phosphorylase Kinase; domain 1 188 283 - -
Mtr4g2961 459 Pfam Protein kinase domain 210 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2961 459 ProSiteProfiles Protein kinase domain profile. 200 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2961 459 SUPERFAMILY Protein kinase-like (PK-like) 188 418 IPR011009 -
Mtr4g2961 459 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 417 - -
Mtr4g2961 459 PANTHER TYROSINE KINASE FAMILY PROTEIN 415 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2961 Mtr-Chr4 43295869 43301122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2961 1 419 MAP Kinase Kinase Kinase AT5G58950 56.979 3.48e-174 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mtr4g2961 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2961 - - lang:109331738 620.542