Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2945 ATGGCTGCTTCACCTTCTTCAGCACTCAATTCTCTCTCCTCTCTCTCTTTCCGATCCTCTTCTTCCTCCTCATGTTTCTCTCTCCTCCCCACAACCCACAAACTCACATTCCCACTTACTAAAACCCCATTCACTCTCTCCACAATTTCCTTCACCGTCAAAGCAATTCCCACCTCCGATGAATTCGACATCACCATCCCAGAAGAAGACCTTCCCTTCAACCCACCGGAAATCCCGGAAGGCTTCATTCCACCACCTTCCATAGACGACGGCCCAGACGAAGACGAAGATGAAATCGCCGCCGCATATGAAGAGCTATACGGTGTTGCGTACAGTGGTGTTAGTGTGCTTGGAAATGATATAAATGTGATGGATAAGAAGGCGAGGAAAGATACCGGATTCGGTTCGGGTGTAAAGAAGGAAAAGATAAGAGATGGGTTGGAAGAAAGAGTTATTCAAGTTAGGAGGGTTACTAAGGTTGTTAAAGGAGGGAAACAAATGAGGTTTAGGGCTATTGTTGTTGTTGGTGATAAGCAAGGAAGAGTTGGTGTTGGTGTTGGGAAAGCTAAGGAAGTTGTTTCTGCTGTTCAGAAATCTGCTATTAATGCTAGGAGGAATCTTATTAGAGTTCCTATGACTAAGTACTTGACTTTTCCTCATAGAGCTGATGGAGATTATGGAGCGTCAAAGGTGATGCTTAGACCCGCTTCTCCTGGTACTGGAGTTATTGCAGGTGGGTCTGTGAGAATTGTTCTTGAAATGGCCGGTGTTGAGAATGCTTTGGGGAAACAACTAGGAAGTGACAATGCACTCAACAATGCCAGAGCAACTATAGCTGCCGTGCAGAAAATGAAGCAGTACAGTGAGGTCGCTGAGGAGCGTGGGATCCCTATGGAAGAATTATGGAAGTAG 912 0.4572 MAASPSSALNSLSSLSFRSSSSSSCFSLLPTTHKLTFPLTKTPFTLSTISFTVKAIPTSDEFDITIPEEDLPFNPPEIPEGFIPPPSIDDGPDEDEDEIAAAYEELYGVAYSGVSVLGNDINVMDKKARKDTGFGSGVKKEKIRDGLEERVIQVRRVTKVVKGGKQMRFRAIVVVGDKQGRVGVGVGKAKEVVSAVQKSAINARRNLIRVPMTKYLTFPHRADGDYGASKVMLRPASPGTGVIAGGSVRIVLEMAGVENALGKQLGSDNALNNARATIAAVQKMKQYSEVAEERGIPMEELWK* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2945 303 Pfam Ribosomal protein S5, N-terminal domain 147 211 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mtr4g2945 303 Gene3D - 144 208 - -
Mtr4g2945 303 Gene3D - 214 302 IPR014721 -
Mtr4g2945 303 SUPERFAMILY dsRNA-binding domain-like 143 212 - -
Mtr4g2945 303 TIGRFAM rpsE_bact: ribosomal protein uS5 146 300 IPR005712 GO:0003735|GO:0006412|GO:0015935
Mtr4g2945 303 ProSitePatterns Ribosomal protein S5 signature. 164 196 IPR018192 -
Mtr4g2945 303 ProSiteProfiles S5 double stranded RNA-binding domain profile. 147 210 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mtr4g2945 303 SUPERFAMILY Ribosomal protein S5 domain 2-like 217 295 IPR020568 -
Mtr4g2945 303 PANTHER RIBOSOMAL S SUBUNIT 9 303 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mtr4g2945 303 Hamap 30S ribosomal protein S5 [rpsE]. 124 300 IPR005712 GO:0003735|GO:0006412|GO:0015935
Mtr4g2945 303 Pfam Ribosomal protein S5, C-terminal domain 224 294 IPR005324 GO:0003735|GO:0005840|GO:0006412
Mtr4g2945 303 PANTHER 30S RIBOSOMAL PROTEIN S5, CHLOROPLASTIC 9 303 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2945 147 303 Cytoplasmic Ribosomal Protein Gene Family AT2G41840 31.515 6.60e-17 77.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2945 4 43177194 43179381 Mtr4g2945 4 43177194 43179381 ECH