Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2940 ATGGGCGAGATTTCAAGTTCTGGGTATAAGGATTATGTCGCTGGGTTACTCGCTGGAGTGGCAGCTGTTGCAACCGGTCATCCCTTTGACACTGTTAAGGTCAAGCTTCAGACGCACAACACAGAAGCGCATCTAGTTCAGTACAGAAATGGATTGCATTGCACTGCTAGGATATTAAAGACCGAAGGAATCAAAGGACTTTATAGAGGAGCAACATCATCTTTTGCTGGGATGGCTTTGGAAGGATCTCTATTTTTCGGCATTTATTCCCAAACAAAAAAGTACCTTCAGGGGGGCATGCAAAGCGGTGCACCACGGCCTCAAGTTATAATACCATCTGCAGCTTTTGCCGGTGCCATAAATAGTTTTGTATTAGGTCCAACAGAACTGATTAAGTGTAGGATGCAGATCCAAGGCACCGACTCCTTAGTTCCGATGTCAAGTAGATACAGTAGTCCCCTTGATTGTGCCCTTAAAACTTTACAAAGTGAAGGGGTGAAAGGAATTTTTCGTGGAAGTGGTACGACATTGCTTAGAGAATCTATAGGGAATGCTACTTTTTTCAGTGTATACGAATACATGCGTTATCACATGCATTCACGTATCAAACCCGCTTCTTCGAATTACAACAATCTGATTGAAATTGGAATTGGGGTTGTTACTGGTGGTGTTAGTGGTGTGGCTTTTTGGTTGGTAGTTATGCCCCTTGACGTGGCAAAGACTCTAATTCAGACAAATCCTGATAAAAACTGTCCAAGAAATCCTTTTACAATCTTGAGTTCAATCTATAAGAGGACTGGTTTGAAGGGGTGCTATGCAGGTCTAGGTCCCACGGTAAGTCGAGCATTTCCTGCTAATGCAGCAACAATTGTCACTTGGGAGCTAGCAATGAAAATGCTAGGCATTAGGCATGACTGA 918 0.4325 MGEISSSGYKDYVAGLLAGVAAVATGHPFDTVKVKLQTHNTEAHLVQYRNGLHCTARILKTEGIKGLYRGATSSFAGMALEGSLFFGIYSQTKKYLQGGMQSGAPRPQVIIPSAAFAGAINSFVLGPTELIKCRMQIQGTDSLVPMSSRYSSPLDCALKTLQSEGVKGIFRGSGTTLLRESIGNATFFSVYEYMRYHMHSRIKPASSNYNNLIEIGIGVVTGGVSGVAFWLVVMPLDVAKTLIQTNPDKNCPRNPFTILSSIYKRTGLKGCYAGLGPTVSRAFPANAATIVTWELAMKMLGIRHD* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2940 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 5 132 - -
Mtr4g2940 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 132 304 - -
Mtr4g2940 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 299 IPR018108 -
Mtr4g2940 305 Gene3D Mitochondrial carrier domain 2 111 IPR023395 -
Mtr4g2940 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
Mtr4g2940 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 197 IPR018108 -
Mtr4g2940 305 Pfam Mitochondrial carrier protein 9 97 IPR018108 -
Mtr4g2940 305 Pfam Mitochondrial carrier protein 113 198 IPR018108 -
Mtr4g2940 305 Pfam Mitochondrial carrier protein 219 300 IPR018108 -
Mtr4g2940 305 Gene3D Mitochondrial carrier domain 112 305 IPR023395 -
Mtr4g2940 305 PANTHER - 5 132 - -
Mtr4g2940 305 PANTHER - 132 304 - -
Mtr4g2940 305 SUPERFAMILY Mitochondrial carrier 8 294 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2940 Mtr-Chr4 43109634 43112396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2940 25 300 Antiporters AT1G79900 28.819 4.40e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2940 K15109 - gmx:100815087 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2940 4 43109634 43112396 Mtr4g2940 4 43109634 43112396 ECH