Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2927 ATGATGAATAATTTGCTTTCACCCTCGACCCTTCAACCATTTACTATTTGCACCACTTTGTTGTTTCTTTTCGTTCTCTTTTGGCTACTGAGAAGCCGCCGCATTAATACTAGTGTAGCTCCAGAAGCCGGTGGAGCTTGGCCTTTGATCGGCCACCTCCACCTCTTAGGTGGATCCCAGCCACCTCATGTCACCTTAGGGAAGCTAGCCGATAAATACGGACCTATCTTCACCTTTCGTTTTGGTGTTCACAAAACACTAGTTATAAGCAGTTGTGAAATGGCGAAACAATGCTTCACTGTAAACGATAGAGCCTTTGCTTCTCGTCCCAAATCTATAGCCTTTGAAATTTTGGGATATAACTTTTCCATGATAGGTTTCAGTCCTTACGGTTCCTATTGGCGCACAGTGCGTAAGATATCCACCATCCACGTCCTCTCCGCCACACGGATAGATATGCTTAAACATGTTATGGAAACTGAGGTTAAGAATGCGATGAAAGATAGTCACTCTTCTGAAAAGGTGGTAACAGAAATGAAGAAATGGTTTGGTGATATAGCGATAAACGTGATGTTTAGAACGGTGGTTGGAGAACGTTTTGACGGGGAAGGAGAAAAGAACAAACAAATACGAAAAGCGTTTAGAGAGCTCTTCCATCTTTGTGGTTCCTTTGTTATATCTGATTCGTTGCCGTTTTTAAGATGGTTGGATTTGGATGGAAAAGAGAAGGAAATGAAGAAAACTGCTAAAGAGTTGGATGAGTTTGTTCAAGGTTGGATTGATCAACACAAACGTAGTAGGGTTCCTGGAAATGAACGTGACTTTATGGATGTTATTATCTCCGCTGTTGATGATCAAGAAATTGATGGTCGTGATGCTGGAACTACTATCAAAACTACGTGTCTGTCATTAATTCTAGCTGGCACAGACACTACAACATCAACATTAACTTGGGCTCTATGTTTACTTCTCAACAACCGTGAAATCCTCAGCAAGGCCGTACAAGAATTAGATACACAAATTGGTAGAGAAAAGATGGTAATGGAATCAGATTTGCACAAGTTAGAGTATCTTCAAGCTATTATCAAGGAAACAATGCGCTTGTGTCCAACCGTGCCACTAAATGTGCCTCATGAGTCCACTGAAGATTGTACCATTGGTGGATATCATGTGCCCGCTGGTACTCGTCTCCTTACAAACATTTCAAAACTTCAGCAAGATCCGTTTATATATTCTAATCCACTAGAGTTTCGACCAGAGAGATTCCTCACAACACACAAGGATATTGATCTCAAAGGCCAACATTTTGAGTTGATTCCATTTGGTGCGGGTAGAAGAATGTGTCCCGGAATATCATTTGGTCTTAAGCTAATTCAAATAACACTTGCAACTTTGTTGCATGGATTTGATATAGTGACTCAAGATGGAGGACCAGTTGGTATGGTTGAACAAAGTGGACTGACCAACGTCAAAGCATCTCCTCTAGAAGTCATTCTTACTCCACGTTTGTCAACAGAACTTTATGGTCAGAATTAA 1536 0.4108 MMNNLLSPSTLQPFTICTTLLFLFVLFWLLRSRRINTSVAPEAGGAWPLIGHLHLLGGSQPPHVTLGKLADKYGPIFTFRFGVHKTLVISSCEMAKQCFTVNDRAFASRPKSIAFEILGYNFSMIGFSPYGSYWRTVRKISTIHVLSATRIDMLKHVMETEVKNAMKDSHSSEKVVTEMKKWFGDIAINVMFRTVVGERFDGEGEKNKQIRKAFRELFHLCGSFVISDSLPFLRWLDLDGKEKEMKKTAKELDEFVQGWIDQHKRSRVPGNERDFMDVIISAVDDQEIDGRDAGTTIKTTCLSLILAGTDTTTSTLTWALCLLLNNREILSKAVQELDTQIGREKMVMESDLHKLEYLQAIIKETMRLCPTVPLNVPHESTEDCTIGGYHVPAGTRLLTNISKLQQDPFIYSNPLEFRPERFLTTHKDIDLKGQHFELIPFGAGRRMCPGISFGLKLIQITLATLLHGFDIVTQDGGPVGMVEQSGLTNVKASPLEVILTPRLSTELYGQN* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2927 511 Pfam Cytochrome P450 43 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2927 511 PANTHER CYTOCHROME P450 82C3-RELATED 39 508 - -
Mtr4g2927 511 Gene3D Cytochrome P450 36 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2927 511 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2927 511 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2927 511 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2927 511 SUPERFAMILY Cytochrome P450 46 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2927 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Mtr4g2927 511 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2927 511 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2927 511 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2927 511 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2927 511 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2927 511 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2927 511 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2927 511 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2927 511 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g2927 511 PANTHER CYTOCHROME P450 39 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2927 Mtr-Chr4 42987260 42992044 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2927 40 508 Cytochrome P450 AT4G31940 48.374 4.73e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2927 - - gmx:100787630 703.745