Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2920 ATGGAGTCACGAGTGTTGTCACGCGCCACCACACTCTCCTCCCTCCCTCGTCTCAACAAACTTCATCGTGAACATCTCACCAATGGCGCTTCCATCCTCTCCGTGAAATCGATCGGATCAGTCTCTGATGGCGGGAACCTTGTCTTTGGAAGACAACTTCGTCCTGAACTCTGTTCACCTGCTCTTAAGAAAAGTGGTGTACTCCTCCGTCCTTGCCTCGCCGCTGCCGATGATTCCGCCGGTGGAGAGAAGGTTGCTCCGGTTGGATTCTTTAGCAAGTATCCGGCTCTTACCACCGGTTTTTTCTTCTTCACTTGGTACTTTTTGAATGTGATTTTCAACATCCTAAACAAGAAGATCTATAATTATTTCCCCTATCCTTACTTCGTGTCGGTTATCCATTTATTGGTGGGAGTGGTTTACTGTTTAGTCAGCTGGACTGTGGGCCTTCCTAAGCGCGCTCCAATAGACGGCAACCAGCTGAAGTTGCTGATTCCTGTAGCTGTCTGTCATGCATTAGGCCATGTGACCAGCAATGTCTCATTTGCTGCAGTTGCTGTTTCTTTCACACATACCATCAAAGCTCTTGAGCCATTCTTTAATGCTGCTGCTTCACAATTCATACTTGGACAATCAATTCCCATCACTCTATGGCTCTCACTTGCTCCCGTTGTTCTTGGTGTGTCATTGGCATCATTGACTGAGCTCTCATTCAATTGGCTCGGCTTCATAAGTGCTATGATTTCAAACATTTCATTTACATACAGGAGTATCTATTCAAAGAAAGCCATGACTGATATGGATAGTACCAATGTCTATGCCTACATTTCCATCATTGCTCTAATTGTATGCATACCACCGGCCTTAATTATTGAAGGGCCTACACTGTTGAAGACCGGCTTCGCTGATGCAATTGCTAAAGTAGGTTTGGTCAAGTTCGTATCAGATCTCTTCTGGGTTGGTATGTTTTACCATCTTTACAACCAGGTAGCCACCAACACATTGGAGAGAGTGGCTCCTCTCACTCATGCAGTTGGCAACGTACTCAAACGTGTATTTGTCATTGGATTTTCAATCATTATCTTCGGTAACAAGATTTCAACCCAAACTGGTATAGGAACTGCCATTGCAATTGCTGGAGTGGCACTCTACTCCTTCATCAAAGCCAAGATCGAGGAAGAGAAGCGACAAGCAAAAGCAGCATAA 1206 0.4511 MESRVLSRATTLSSLPRLNKLHREHLTNGASILSVKSIGSVSDGGNLVFGRQLRPELCSPALKKSGVLLRPCLAAADDSAGGEKVAPVGFFSKYPALTTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLVSWTVGLPKRAPIDGNQLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVLGVSLASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALIVCIPPALIIEGPTLLKTGFADAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTAIAIAGVALYSFIKAKIEEEKRQAKAA* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2920 401 Pfam Triose-phosphate Transporter family 98 385 IPR004853 -
Mtr4g2920 401 PANTHER SOLUTE CARRIER FAMILY 35 12 393 - -
Mtr4g2920 401 PANTHER BNAC02G47130D PROTEIN 12 393 - -
Mtr4g2920 401 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 97 395 IPR004696 GO:0016021|GO:0022857|GO:0055085
Mtr4g2920 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 317 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2920 Mtr-Chr4 42905766 42909941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2920 1 399 Antiporters AT5G46110 77.696 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2920 K15283 - gmx:732611 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2920 4 42905766 42909941 Mtr4g2920 4 42905766 42909941 ECH