Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2918 ATGGCTTCTAAAAATGACTTATACAAACCAAGCGAGCTTTTCCAAGCTCAAACACACTTATACAAAATCATGTATAGTTACCTTAATCCAATGTCTGTCAAATGGGCACTTGACCTTAAAATACCAGATATCATCCACAACCATCGCCAAGCCATTACTCTTTCTGAGCTCATTTCAGCTCTTAAGGTTCCACAATCAAAAGAAACATGCGTCGGTCGACTAATGCGCTTGTTAGCACACATTGATTTCTTTGCAATTGTCAAAATTGATGAAACCAAAGAAGGATATACTCTTACTCCAACATCACAACTCCTTGTCTCTACCACTGATCATTGTTTATCTTCAATGGTTCGGTTGCTGAACATTCCACCTATTGTTGGCTCGTACAATCATTTAGGGAAATGGACTTGTGGAGAGGATCTCACAATTGTTGAGACTGCATTAGGCCCTGAAAGTTATTGGGATTTTATTCATCAAAATTCTTCATACTTGAAGACTTTTAATGATGCTATGGAAAGTGATTCTCATGTTGTGAGGTTGGCCTTGAGAGATTGTAAGTCTGTTTTTCAAGGGATTGGTTCATTGGTTGATGTTGGTGGTGGAACTGGAAACACAGCTAAGATTATATGTGAGGCGTTTCCAGAGCTGAAGTACATTGTCCTGGACCTTCCACAGGTTGTTTCAGGTTTAACAGGAACCAATAACTTGAGTTTTGTTGGTGGGAACATGTTTAAATCCATCCCTCAAGCTGATGCTGTTTCGCTCAAGTGGGTGTTACACAATTGGAGTGATGATGATTGCATTAAAATACTAAAAAATTGCAAGAAAGCTATTTCTGGAAAAGAGAAAGGAGGAAAAGTGATAATCATAGATGCAGTGATAAATGAAAAACAAGATGAACATGAAATGACAGAAGTAAAGCTTTTGCTTGATGTGGTTATGATGACCTGTTTCAATGGAAAAGAGAGAAATGAAAAAGAATGGAAACAACTTTTCTTACAAGCTGGCTTCAAATATTACAAGATCTTCCTCACATTTGGTTTTAGGTCTCTTATTGAGCTCTATCCTTAA 1071 0.3754 MASKNDLYKPSELFQAQTHLYKIMYSYLNPMSVKWALDLKIPDIIHNHRQAITLSELISALKVPQSKETCVGRLMRLLAHIDFFAIVKIDETKEGYTLTPTSQLLVSTTDHCLSSMVRLLNIPPIVGSYNHLGKWTCGEDLTIVETALGPESYWDFIHQNSSYLKTFNDAMESDSHVVRLALRDCKSVFQGIGSLVDVGGGTGNTAKIICEAFPELKYIVLDLPQVVSGLTGTNNLSFVGGNMFKSIPQADAVSLKWVLHNWSDDDCIKILKNCKKAISGKEKGGKVIIIDAVINEKQDEHEMTEVKLLLDVVMMTCFNGKERNEKEWKQLFLQAGFKYYKIFLTFGFRSLIELYP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2918 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 356 IPR016461 GO:0008168
Mtr4g2918 356 PANTHER O-METHYLTRANSFERASE 3 355 IPR016461 GO:0008168
Mtr4g2918 356 Gene3D - 1 105 IPR036388 -
Mtr4g2918 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Mtr4g2918 356 Pfam O-methyltransferase domain 143 338 IPR001077 GO:0008171
Mtr4g2918 356 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 3 355 - -
Mtr4g2918 356 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Mtr4g2918 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 354 IPR029063 -
Mtr4g2918 356 Gene3D Vaccinia Virus protein VP39 107 356 IPR029063 -
Mtr4g2918 356 SUPERFAMILY "Winged helix" DNA-binding domain 11 108 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2918 Mtr-Chr4 42888563 42891088 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2918 30 354 Monolignol Biosynthesis Gene Families AT5G54160 30.931 1.82e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2918 K22588 K13262 gmx:100818724 414.846