Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2894 ATGGAATCAGATCTGAGTTTTGCAAGAAAATCTCCTAACCTTTCTATGGATCTTCCAAAAAGTCCTTCCATGAAATCAGCGATCTCCACAATGGTTCCTTCTCAATCAGGTCCAACTTTTTCACCTCCACCATCACATTGCACTACATATCTGTACCAAAATCGTTGCAATCAATTTAAGGAACATCCTCTGAACAAGGCTTACCACCACTCTAGTTTTTCTAGAGTGGCTCCTTCCTCCATCAGCTCATTTCCTATGACCCCAACCCCTTCCTACAAGGATGCGTACACCAGTGGATCCCAAAGTGAATTTATCAGTGCTCGAAATCCAATGATCTTTGCGCCAAACTATAACAAAATGGAAGTCATGCATGGTCCCGTTAACTCTAGCAAAGGAACTCGTGAATTGTCTACAAATAATCTCTTTCAATATGGTGAAACTTCACAATATCGGGTGAGTCCCTCTCTATCACCATCACTAGTTTCTGATGGACATCCATCTGTGTCAGTTAAGTCTGAGCTTCAAGGCGGTCTTTCATGCAATGGTGGAATTGGAAACAATTCCCGAGAAAATAATCAAAGGCATATTCATAGTGACCAAAATCGCCAACAAACTAATCAAAATAATAGTGAAATTCGACTCAAGGATCCCAATATAATCAAGGGTCAATGGACTACAAATGAGGATAGGGTTCTTGTTCAATTGGTGAATCACTTTGGTCTTAGAAAATGGTCCCAGATTGCGAAGTACATGAAAGGTAGGATTGGAAAACAGTGTAGAGAGAGATGGAATAACCATCTTCGTCCGGACATTAAGAAGGATTCATGGACCGAAGAAGAGGACAAAATACTAATCGAAGCTCATAAGATAGTTGGGAACAAGTGGGCTGAAATTGCAAAGAGAATGCAAGGGCGCACCGAGAACTCAATCAAGAACCACTGGAACGCCACCAAGCGCCGCCATAATACTAAGAGAAAGAATCGGAGTAATAGTTCAAAGGGAAAACTACTCTTGAAATACATAATGGAAGTCAATGATGCTAAGGAAGCTGAAAAGGAGCTGATGACGAATTCTACGAGCGTGATGAAATTTGGGAATCACCCAAACTTTGAAAGCTCGGAGAGTGATTTTAGCTCTGAAGGTTTGGTTAATCCAAATGAGGAAATTGATGGGTATGCTCCAATGATGTTCAATGGTGATGATGGAATGGCAAGTGGATCTGGCACCACAACGAGTTATGATTTTGGAACATATGGAATGGAGTTTTTTCCCGAGGTTCCAATGAAGCAGGAAATTGATTTCATGGGTATGATCTATAGAAATCCTTAA 1329 0.4086 MESDLSFARKSPNLSMDLPKSPSMKSAISTMVPSQSGPTFSPPPSHCTTYLYQNRCNQFKEHPLNKAYHHSSFSRVAPSSISSFPMTPTPSYKDAYTSGSQSEFISARNPMIFAPNYNKMEVMHGPVNSSKGTRELSTNNLFQYGETSQYRVSPSLSPSLVSDGHPSVSVKSELQGGLSCNGGIGNNSRENNQRHIHSDQNRQQTNQNNSEIRLKDPNIIKGQWTTNEDRVLVQLVNHFGLRKWSQIAKYMKGRIGKQCRERWNNHLRPDIKKDSWTEEEDKILIEAHKIVGNKWAEIAKRMQGRTENSIKNHWNATKRRHNTKRKNRSNSSKGKLLLKYIMEVNDAKEAEKELMTNSTSVMKFGNHPNFESSESDFSSEGLVNPNEEIDGYAPMMFNGDDGMASGSGTTTSYDFGTYGMEFFPEVPMKQEIDFMGMIYRNP* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2894 442 MobiDBLite consensus disorder prediction 1 40 - -
Mtr4g2894 442 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 216 271 IPR017930 -
Mtr4g2894 442 PANTHER MYB PROTEIN-RELATED 155 361 - -
Mtr4g2894 442 ProSiteProfiles Myb-like domain profile. 216 267 IPR001005 -
Mtr4g2894 442 CDD SANT 275 318 IPR001005 -
Mtr4g2894 442 MobiDBLite consensus disorder prediction 198 214 - -
Mtr4g2894 442 MobiDBLite consensus disorder prediction 155 191 - -
Mtr4g2894 442 CDD SANT 224 267 IPR001005 -
Mtr4g2894 442 Pfam Myb-like DNA-binding domain 221 267 IPR001005 -
Mtr4g2894 442 Pfam Myb-like DNA-binding domain 273 315 IPR001005 -
Mtr4g2894 442 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 272 322 IPR017930 -
Mtr4g2894 442 Gene3D - 220 272 - -
Mtr4g2894 442 ProSiteProfiles SANT domain profile. 271 322 IPR017884 -
Mtr4g2894 442 SMART sant 220 269 IPR001005 -
Mtr4g2894 442 SMART sant 272 320 IPR001005 -
Mtr4g2894 442 ProSiteProfiles Myb-like domain profile. 268 318 IPR001005 -
Mtr4g2894 442 MobiDBLite consensus disorder prediction 155 214 - -
Mtr4g2894 442 PANTHER MYB DOMAIN PROTEIN 100-RELATED 155 361 - -
Mtr4g2894 442 Gene3D - 274 339 - -
Mtr4g2894 442 SUPERFAMILY Homeodomain-like 218 314 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2894 Mtr-Chr4 42613404 42617451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2894 215 345 MYB Transcription Factor Family AT4G18770 67.939 3.32e-59 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr4g2894 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2894 K09422 K21769 mtr:MTR_4g088015 861.677