Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2890 ATGATTGAGGTTGAACAGCTTGTTGGTTCAGTCACCTCTCAACAATTCAAACAATCACCTGTTTCTGGACCTGCCACCATTCGTCTCCTCTTCCATGACTGCTTTGTAGAAGGTTGTGATGCATCAATTTTAATAGCATCAAAGCCAGGGAGCAAGGAGTTGGCAGAGAAAGATGCAGAGGATAATAAAGATTTGAGGATGGAGGGTTTTGAGACTATAAGGAAGGCAAAAGAAGTGGTGGAGAAAAAGTGTCCTACTGTGGTGTCCTGTGCAGATATTCTTGCAATTGCAGCAAGAGATTTTGTGCACTTAGCAGGGGGACCCTATTATCAAGTGAAGAAGGGAAGATGGGATGGAAAGATATCAATGGCATCAAGGGTAGGGTCAAACATCCCCCGTGCAAACTCAACCGTTGATGAGCTCATCAAAATCTTCAATTCAAAAGGCTTAACCATACAGGACATGGTTGCTCTTTCTGGTGCCCACACAATTGGATTTGCTCATTGCAAGAACTTTTTAACCCGCCTCTACAATTACCGAGGCAAGGGTCAACCCGATCCGGATATGAATCCTAAACTATTGAAAGCTCTTAGGATGTACTGCCCAAATTTTGGTGGAAACACAGACATTGTTGCCCCATTTGATGCAACTACTCCTTTCATATTTGACCATGCATATTATGGTAACTTGCAGAACAAGATGGGGTTGCTAGCATCTGACCAAGCTTTGGCTTTGGATCCACGAACCAAGTCACTGGTTCAAGATTTTGCAAAGGATAAACAAAAGTTTTTTCAAGCTTTTGCATCTGCTATGGACAAAATGAGTTTAGTGAAAGTTGTGAGAGGAAAAAAGCATGGGGAGAGAAGGAGAGATTGTAGCATGCATATGTGA 891 0.4254 MIEVEQLVGSVTSQQFKQSPVSGPATIRLLFHDCFVEGCDASILIASKPGSKELAEKDAEDNKDLRMEGFETIRKAKEVVEKKCPTVVSCADILAIAARDFVHLAGGPYYQVKKGRWDGKISMASRVGSNIPRANSTVDELIKIFNSKGLTIQDMVALSGAHTIGFAHCKNFLTRLYNYRGKGQPDPDMNPKLLKALRMYCPNFGGNTDIVAPFDATTPFIFDHAYYGNLQNKMGLLASDQALALDPRTKSLVQDFAKDKQKFFQAFASAMDKMSLVKVVRGKKHGERRRDCSMHM* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2890 296 PRINTS Plant peroxidase signature 25 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 PRINTS Plant peroxidase signature 68 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 PRINTS Plant peroxidase signature 87 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 PRINTS Plant peroxidase signature 106 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 PRINTS Plant peroxidase signature 153 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 PRINTS Plant peroxidase signature 213 228 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 PRINTS Plant peroxidase signature 229 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 PRINTS Plant peroxidase signature 269 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 CDD secretory_peroxidase 4 293 IPR033905 GO:0004601|GO:0042744
Mtr4g2890 296 ProSitePatterns Peroxidases active site signature. 23 34 IPR019794 GO:0004601
Mtr4g2890 296 ProSiteProfiles Plant heme peroxidase family profile. 3 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 PANTHER PEROXIDASE 25-RELATED 3 292 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 ProSitePatterns Peroxidases proximal heme-ligand signature. 154 164 IPR019793 -
Mtr4g2890 296 PRINTS Haem peroxidase superfamily signature 23 37 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 PRINTS Haem peroxidase superfamily signature 88 105 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 PRINTS Haem peroxidase superfamily signature 106 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 PRINTS Haem peroxidase superfamily signature 154 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 PRINTS Haem peroxidase superfamily signature 215 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 Pfam Peroxidase 11 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 Gene3D - 3 294 - -
Mtr4g2890 296 SUPERFAMILY Heme-dependent peroxidases 4 294 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr4g2890 296 Gene3D Peroxidase, domain 2 132 274 - -
Mtr4g2890 296 PANTHER PEROXIDASE 19 3 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2890 Mtr-Chr4 42585290 42589549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2890 3 296 Peroxidase AT2G34060 65.306 1.80e-148 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2890 K00430 - gmx:100777463 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2890 4 42585290 42589549 Mtr4g2890 4 42585290 42589549 ECH