Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2872 ATGACTACAATGACGTTAACCCTACTTCTTCTTCTTCACATATTCTTCTCATCAAGTGCTCATTCCTCCAACCACCACAACCGCCGTATCCTCCACCAACCACTGTCGTTTCCTTCTATCTCTCTTCCACCAACACAACCGCCATCTTCTTCACCACAAACTCAACCAAAACCACAACAAACACAACCCAAACTTCCATTTTCCTCCATCTCTTCATCTTCACCACCACAAACACCATTCTTCCCATCTTACTATTCACCACCACTCCCTCCTTCTCCACCTTTCCTCGCCACTTTCCCAGCCAACATCTCCTCCTTACTCCTCCCACAACACCACACTCGAACACACAACCACCGCCACGCTGCTGCTATTGTCATCTCACTCTCTCTCCTCTCCCTCGTTATCCTCTCTATTTCCACTGTCTTCGCCTTCCACCGCCACCGTCACAGCCACAAAACTTCTTCCACCACCGTTAACGATGATAATGCTTCAAGATCAGATAGTCTCCGTTTGTTCCCACCAAACACCGCTACTTCAGACTCCGTCGACCAAACAACCAACGACAAGTCAAGTTCTATGTCGGAGTTATTCAACCTTGGAACTATAACAACTTTAGATGACACAAAAGCAACAGCAGAGTCAAGCTGTAACGGTAACAGCAATGACGGTTTCCCTCCGCCGTACCGGTATGTTACAGACTCGCCGGAGTTACACCCTTTACCACCACTGCCACGTCACAATGTCAGAACATGGAAGAATGAACCAAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAAAGAAAAAGAAAGAGTACATGAAGAGTTTTATTCACCGAAAGGTTCTCCTTCTGGGAACAAACAACAACACAGTCCTTCTCTTTCTCCTTCTTCTTCCCCGGTTGTCACAGTTGCTGTTGCTGCTACAAGCTCACGTTCCTTCAACGTTTTTCACTATGATAAATTTGGTAGTAAAAGCTTTACTTCAAGAACTGCTTCATACCCTCTTTCCTACTCTCTCTCACGTTCTCCTTCACTTAATCTTAGCCCTATTGAAAGTGTGCAATCTTTTCCTCCTATAAACCCTGTTTCACCATCTTTTTCTTCTGAATCTTGTTCTCCTATGCCGATGGAAGATTTTGGTTTGAAATGGGATGGTAATGATACTCAGGTGAGTAAAATGGCTCCTCCTGTTCCCCCGCCGCTGCCGCCGAGGTTATGGGAGACTCCGGTGGTGGTTTCTCAAGATGGTAATGGTGATGTTAGTGTTGAGAATGAAGAAAATTTAAAGCCAAAGTTGAAGGCTTTGCATTGGGATAAAGTTAAGGCTAGCTCAGATAGGGCCATGGTTTGGGATCAACTGAGACCAAGTTCTTTTCAATTGAATGAGGATATGATTGAGTCACTATTCATGGCAAATAATTCCAATTCTAGTGGAAATTCTGCTTTGGCTTCTAATCCTAAAGATAATGCTAGGCATCAAATAATTCATGCTTCTCCAATGCCACCTGAAAATAGGGTACTTGATCCTAAGAAGTCTCAGAACATTGCCATTTTGCTTCGAGCACTGAATGTAACAATTGATGAAGTTTGTGAAGCCCTCAGGGAAGGCAATTGTGATACATTGGGAACAGAACTTCTTGAAAGTTTGTTAAAGATGGCTCCTACTGAAGAGGAAAAATCTAAGCTGAAGGAGTTTAAAGATGAGTCGCCTTTCAAGCTAGGCCCAGCTGAGAAATTTCTTAAAGTCATGCTTGATATACCTTTTGCATTCAAAAGAATGGATGCTATGCTCTACATTGCTAATTTTGATTCAGAATTGGAATACCTTAAGAAGTCCTTTGATACTCTGAAGGTGGCTTGTGAGGAATTAAAGAATAGCAGAATGTTTATGAAGATACTTGAGGCAGTTCTTAGAACAGGAAATCGAATGAACGTTGGCACCGACCGTGGTGACGCACAAGCATTCAAACTGGACACACTTTTGAAGTTGGTTGATATCAAGGGAACTGATGGAAAGACTACTCTTTTACATTTCGTTGTGCAAGAAATTGTCAGAACTGAGTGTTCTCATGTATCTCGTGCCAGTAATCACTCCGTCAACAACCCTGAATATACTCTTCAAGACGAGGTTGACTCTATGAAGCTTGGACTGCAAGTTGTATCAGGTTTGAGTGGGGAACTCGCCAATGTTAAAAAGGCAGCTGTTATGGATTCAGACGCACTGAGTAGTGATGTTTCTAAACTTGCCAAAGGAATCAAAAAGGTTGCGGAAGTGGTAAAATTGAATGAAGAATCACCATTGAAAGAAACTAACCAAAAATTTTCTGAGGCAATGAAAGGTTTCTTGGAGAGGGGAGAGGAAGAGATTTCAAGAATCATGGCACAAGAGAAAAATGCTCTCTCTTCTGTGAAGGATATAACCGAGTATTTCCATGGTAATTCAGCAAAGGAAGAAGCTCATCGTTTTAGGATATTCATGGTTGTACGGGATTTTCTTTCGATACTAGATGGTGTATGCAAGCAAGTTGGGAAAGCAAACGAGAGGACTTTAGTTGGGTCGCGGCAATATGTGATGCCTGCAGTCACTACATTGACACCAATTTTCCCTGAGTTTAATGGTAAGCAAACATCTGATTCCTCAGAATCTGATTAG 2667 0.4233 MTTMTLTLLLLLHIFFSSSAHSSNHHNRRILHQPLSFPSISLPPTQPPSSSPQTQPKPQQTQPKLPFSSISSSSPPQTPFFPSYYSPPLPPSPPFLATFPANISSLLLPQHHTRTHNHRHAAAIVISLSLLSLVILSISTVFAFHRHRHSHKTSSTTVNDDNASRSDSLRLFPPNTATSDSVDQTTNDKSSSMSELFNLGTITTLDDTKATAESSCNGNSNDGFPPPYRYVTDSPELHPLPPLPRHNVRTWKNEPKKKEEEEEEEEEEEKKEKERVHEEFYSPKGSPSGNKQQHSPSLSPSSSPVVTVAVAATSSRSFNVFHYDKFGSKSFTSRTASYPLSYSLSRSPSLNLSPIESVQSFPPINPVSPSFSSESCSPMPMEDFGLKWDGNDTQVSKMAPPVPPPLPPRLWETPVVVSQDGNGDVSVENEENLKPKLKALHWDKVKASSDRAMVWDQLRPSSFQLNEDMIESLFMANNSNSSGNSALASNPKDNARHQIIHASPMPPENRVLDPKKSQNIAILLRALNVTIDEVCEALREGNCDTLGTELLESLLKMAPTEEEKSKLKEFKDESPFKLGPAEKFLKVMLDIPFAFKRMDAMLYIANFDSELEYLKKSFDTLKVACEELKNSRMFMKILEAVLRTGNRMNVGTDRGDAQAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIVRTECSHVSRASNHSVNNPEYTLQDEVDSMKLGLQVVSGLSGELANVKKAAVMDSDALSSDVSKLAKGIKKVAEVVKLNEESPLKETNQKFSEAMKGFLERGEEEISRIMAQEKNALSSVKDITEYFHGNSAKEEAHRFRIFMVVRDFLSILDGVCKQVGKANERTLVGSRQYVMPAVTTLTPIFPEFNGKQTSDSSESD* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2872 888 MobiDBLite consensus disorder prediction 156 194 - -
Mtr4g2872 888 ProSiteProfiles Formin homology-2 (FH2) domain profile. 427 866 IPR015425 -
Mtr4g2872 888 MobiDBLite consensus disorder prediction 55 76 - -
Mtr4g2872 888 Coils Coil 256 279 - -
Mtr4g2872 888 MobiDBLite consensus disorder prediction 40 54 - -
Mtr4g2872 888 MobiDBLite consensus disorder prediction 285 303 - -
Mtr4g2872 888 SUPERFAMILY Formin homology 2 domain (FH2 domain) 400 853 - -
Mtr4g2872 888 PANTHER FORMIN-RELATED 8 886 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Mtr4g2872 888 MobiDBLite consensus disorder prediction 149 194 - -
Mtr4g2872 888 Gene3D Formin, FH2 domain 436 861 IPR042201 -
Mtr4g2872 888 MobiDBLite consensus disorder prediction 211 303 - -
Mtr4g2872 888 SMART it6_source 427 855 IPR015425 -
Mtr4g2872 888 MobiDBLite consensus disorder prediction 36 76 - -
Mtr4g2872 888 PANTHER FORMIN-LIKE PROTEIN 2 8 886 - -
Mtr4g2872 888 Pfam Formin Homology 2 Domain 430 840 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2872 Mtr-Chr4 42424890 42428648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2872 430 858 FH2 protein (formin) Gene Family AT3G25500 67.599 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2872 - - gmx:100786203 899.812