Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2868 ATGGAAGGAGGAGGAGCTCCACCAGCTGACACCGTGATGTCAGATGCTGCACCGGCGCCGCCGCAGATGGGGATCGAGAATATTCCGGCAACCCTTAGCCATGGGGGTAGGTTCATTCAATACAACATTTTCGGTAACATTTTTGAAGTTACTGCAAAATACAAACCACCCATCATGCCAATCGGTAAAGGCGCTTATGGTATTGTTTGCTCTGCTCATAATTCGGAGACAAATGAACATGTTGCGGTTAAGAAGATTGCAAATGCATTTGACAACAAGATTGATGCTAAGAGGACTCTCCGTGAAATCAAGCTGCTTCGCCATATGGATCATGAAAACGTGGTTGCAATCAGGGATATAGTGCCACCACCCCAGAGGGAGGTATTCAATGATGTTTACATTGCATATGAGCTAATGGACACTGACCTTCACCAAATCATTCGATCAAATCAAGCACTATCGGAGGAGCACTGTCAGTACTTTCTGTACCAAATCCTTCGTGGTTTGAAGTACATACATTCTGCAAATGTTCTGCATAGGGACTTAAAACCCAGCAACCTTCTCCTGAACGCCAACTGTGACTTAAAGATTTGTGATTTTGGACTGGCCCGTGTAACATCTGAAACCGATTTTATGACTGAATATGTTGTTACTAGATGGTACCGTGCACCAGAGCTTCTGTTAAACTCTTCTGATTATACAGCAGCAATTGATGTATGGTCTGTTGGTTGTATTTTCATGGAACTGATGGATCGAAAGCCTTTGTTTCCTGGCAGAGATCACGTGCATCAGCTGCGTCTACTCATGGAGTTGATCGGTACCCCGTCAGAAGATGATTTGGGGTTTCTGAATGAAAATGCTAAGAGATACATTAGGCAACTACCTCCTTACCGCCGTCAATCTTTCCAAGAAAAGTTTCCGCAAGTCCATCCTGAAGCTATAGATCTTGTTGAAAAAATGTTAACTTTTGATCCAAGAAAAAGAATTACTGTTGAAGATGCACTGGCACACCCCTACTTGACATCTCTGCATGACATCAGCGATGAACCTGTGTGCATGACTCCCTTCAGCTTTGACTTTGAACAGCATGCGTTGACTGAGGAACAGATGAAAGAACTGATATACAGAGAGGCTCTAGCATTTAACCCTGAGTACCAGCAGTAG 1164 0.4381 MEGGGAPPADTVMSDAAPAPPQMGIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSAHNSETNEHVAVKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEDDLGFLNENAKRYIRQLPPYRRQSFQEKFPQVHPEAIDLVEKMLTFDPRKRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNPEYQQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2868 387 Gene3D Phosphorylase Kinase; domain 1 38 377 - -
Mtr4g2868 387 ProSiteProfiles Protein kinase domain profile. 55 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2868 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Mtr4g2868 387 CDD STKc_TEY_MAPK 48 383 - -
Mtr4g2868 387 SUPERFAMILY Protein kinase-like (PK-like) 60 348 IPR011009 -
Mtr4g2868 387 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 26 385 - -
Mtr4g2868 387 ProSitePatterns MAP kinase signature. 90 193 IPR003527 GO:0004707|GO:0005524|GO:0006468
Mtr4g2868 387 Gene3D Transferase(Phosphotransferase) domain 1 139 367 - -
Mtr4g2868 387 ProSitePatterns Protein kinases ATP-binding region signature. 61 85 IPR017441 GO:0005524
Mtr4g2868 387 SMART serkin_6 55 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g2868 387 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 26 385 - -
Mtr4g2868 387 Pfam Protein kinase domain 60 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2868 Mtr-Chr4 42375099 42381916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2868 1 387 MAP Kinase Gene Family AT2G43790 88.354 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mtr4g2868 Pkinase 1.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2868 K14512 - gmx:547616 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2868 4 42375099 42381916 Mtr4g2868 4 42375099 42381916 ECH
Mtr2g0510 2 5068425 5072738 Mtr4g2868 4 42375099 42381916 ECH