Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2859 ATGGGAAAGAAGGGGAGTTGGTTTGCAGCAATCAAGAGGGTTTTTACACACCACTCTAAGGGGAAGGATTCAGAAAACAAAAGCACAAAAGAGAAGAAGAAAGGTGTAGGAAAACTAAAGCATGGAGAGACCAATTCTTTCATCCCCCTCTTCAGAGAACCAAGCAGCATTGAGAAAATATTTGGTGACTTTGAAAGAGAACAGCAAGTACTTGCAATTAGGCCTCCCACACCTCCCGAGCGACCAAAAACGCCACCTTTCGTCCCTCCTAGAGTTGCTTCTCCTAGGCCTCCTTCTCCTAAGCCTCCTTCTCCAAGGGATCCATCTCCAAGGGCCGCTTCTCCGCGAGTTACCTCTCCAAAAGCGGCATCTTCGCGGAATGTTCATCAACACAAGGAGGTTCGCTACAGACCAGAACCAACTTTACAGAACCAGCATGTCTCGGCGACTAAGATCCAGTCTGCTTACAGAGGTTATATGGCCAGGAAGAGTTTTAGAGCTCTGAAAGGTTTGGTAAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACAGTTAATGCCATGAAACACATGCAGCTGTTAGTGCGAGTTCAGTCTCAGATTCAATCTCGAAGAATCCAGATGTTAGAAAACCAGGCACGATATCAAGCCGAGTTCAAGAATGAAGCTGGAAGTACCTTGGGGAAAAGTGCTTTAGGACACGGTTCTGAGGCAGGTAACAATGAAGATTGGGATGATAGCTTACTGACAAAAGAGGAAGTAGAAGCGAGGTTGCAGAGGAAGGTTGAAGCAATCATCAAAAGAGAGAGATCAATGGCATTTGCATATTCACATCAGTTATGGAAGGCCACTCCAAAATCAACTCAAACGCCTGTGACAGATATGCGATCCAGCGGATTCCCGTGGTGGTGGAACTGGTTGGAAAGACAATTACCAGCATCAAATCCACCAGAAAAACAGGTTCTGAAGAATTTCCAATTCACACCACCAAGACCATATTCAGAACAAAAGACAAGTCCAAGACCTGGCTCAAGCTCTCAAAGGCCTTTTGCCTTTGATAACATGGATACACCAACTCCAAAATCAACAAGATCGACTATATTTCCATCTTCAAGACCATCTAGAACTCCTCCATTTAGAACTCCACAAGGAAACACTTCAAGCGCGACGTCAAAATATTCAAGGCCAAGGGGAGTAGGATCCAATTCACCTTTCGACGTACCGTTGAAGGACGATGATAGTCTCACAAGCTGTCCACCGTTCTCCGTTCCAAACTACATGGCTCCAACTGTTTCTGCTAAGGCCAAAGTACGTGCTAGTAGTAATCCAAGAGAAAGATTTGGCGGTGGTAGTAGTGGCTGTGCAACTCCAACAAGCACTGATTCAAAGAGGAGAGTCTCATTTCCTTTGTCACAAGGAATAGGGTCATTCAAATGGAATAAAGGGTCAATGTTCTCTAGAAATAAGGATCCTCATGGCTCTCACAGGACACCAGATAAATACCAGTCACTTGAATCTATTGGAAATGTGAGTGTGGATTCAGCTGTATCCTTGCCTGCAAGGGTTGAAAGAAAGCCTTTTACAAGATTTGTGTGA 1605 0.4498 MGKKGSWFAAIKRVFTHHSKGKDSENKSTKEKKKGVGKLKHGETNSFIPLFREPSSIEKIFGDFEREQQVLAIRPPTPPERPKTPPFVPPRVASPRPPSPKPPSPRDPSPRAASPRVTSPKAASSRNVHQHKEVRYRPEPTLQNQHVSATKIQSAYRGYMARKSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNEAGSTLGKSALGHGSEAGNNEDWDDSLLTKEEVEARLQRKVEAIIKRERSMAFAYSHQLWKATPKSTQTPVTDMRSSGFPWWWNWLERQLPASNPPEKQVLKNFQFTPPRPYSEQKTSPRPGSSSQRPFAFDNMDTPTPKSTRSTIFPSSRPSRTPPFRTPQGNTSSATSKYSRPRGVGSNSPFDVPLKDDDSLTSCPPFSVPNYMAPTVSAKAKVRASSNPRERFGGGSSGCATPTSTDSKRRVSFPLSQGIGSFKWNKGSMFSRNKDPHGSHRTPDKYQSLESIGNVSVDSAVSLPARVERKPFTRFV* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2859 534 MobiDBLite consensus disorder prediction 482 508 - -
Mtr4g2859 534 MobiDBLite consensus disorder prediction 442 470 - -
Mtr4g2859 534 ProSiteProfiles IQ motif profile. 145 173 IPR000048 GO:0005515
Mtr4g2859 534 MobiDBLite consensus disorder prediction 1 47 - -
Mtr4g2859 534 PANTHER IQ-DOMAIN 13 1 531 - -
Mtr4g2859 534 MobiDBLite consensus disorder prediction 75 110 - -
Mtr4g2859 534 Pfam Protein of unknown function (DUF4005) 395 476 IPR025064 -
Mtr4g2859 534 MobiDBLite consensus disorder prediction 331 414 - -
Mtr4g2859 534 MobiDBLite consensus disorder prediction 16 40 - -
Mtr4g2859 534 MobiDBLite consensus disorder prediction 455 470 - -
Mtr4g2859 534 Pfam IQ calmodulin-binding motif 147 166 IPR000048 GO:0005515
Mtr4g2859 534 PANTHER IQ-DOMAIN 5-RELATED 1 531 - -
Mtr4g2859 534 MobiDBLite consensus disorder prediction 68 147 - -
Mtr4g2859 534 MobiDBLite consensus disorder prediction 331 401 - -
Mtr4g2859 534 Gene3D - 124 165 - -
Mtr4g2859 534 SMART iq_5 144 166 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2859 Mtr-Chr4 42268539 42273492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2859 1 533 IQD Protein Family AT3G59690 51.056 2.70e-162 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2859 - - gmx:100807777 741.11