Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2851 ATGATAGCTAGCTCCTTCTGCAATGCTGATTCTATGTTTTCTAGTGAAGAAGGGATAGATGTTAGAAAGATGATGGGACATAAAAGGAGCCCCTGCTCTGTTGATCAAAGCAATTATAATTCTATTGCATCTAAAAAGCAAAAGCCTGATTTGTCGATCAGCACTAAGGATAGGAAGGAAAAGATTGGTGAACGAATTGTTGCTCTTCAACAGCTTGTTTCACCATATGGAAAGACAGATACATCTTCTGTTCTAAAGGAGGCGATGGACTACATAGGGTTCCTTCATAAACAAGTTAAGCTGCTTAGTGCTCCTTACCTCGAAACTGCACCAGCAACCCAGTTACAGGATACAGAGTCATGCAGCCTGAGGAGTAGAGGGTTATGTATTGTTCCTGTCTCGTTTACTAATGGAGTTGCTGAGGGAAATGGTGCAGATATTTGGGCACCAATCAAGACCACTTCACCTAAACATGAGAAAGATGTCTCGCAATTTTAG 498 0.4137 MIASSFCNADSMFSSEEGIDVRKMMGHKRSPCSVDQSNYNSIASKKQKPDLSISTKDRKEKIGERIVALQQLVSPYGKTDTSSVLKEAMDYIGFLHKQVKLLSAPYLETAPATQLQDTESCSLRSRGLCIVPVSFTNGVAEGNGADIWAPIKTTSPKHEKDVSQF* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2851 165 SMART finulus 52 101 IPR011598 GO:0046983
Mtr4g2851 165 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
Mtr4g2851 165 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 24 146 - -
Mtr4g2851 165 MobiDBLite consensus disorder prediction 26 48 - -
Mtr4g2851 165 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 53 110 IPR036638 GO:0046983
Mtr4g2851 165 Gene3D - 44 117 IPR036638 GO:0046983
Mtr4g2851 165 PANTHER TRANSCRIPTION FACTOR BHLH154 24 146 - -
Mtr4g2851 165 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Mtr4g2851 165 MobiDBLite consensus disorder prediction 31 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2851 Mtr-Chr4 42201802 42206629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2851 24 163 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 55.714 5.33e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2851 - - gmx:100809747 282.722